PDB entry 4l0c

View 4l0c on RCSB PDB site
Description: crystal structure of the n-fopmylmaleamic acid deformylase nfo(s94a) from pseudomonas putida s16
Deposited on 2013-05-31, released 2014-06-04
The last revision was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Deformylase
    Species: Pseudomonas putida [TaxId:1042876]
    Gene: PPS_4059
    Database cross-references and differences (RAF-indexed):
    • Uniprot F8G0M2 (0-254)
      • engineered mutation (93)
  • Chain 'B':
    Compound: Deformylase
    Species: Pseudomonas putida [TaxId:1042876]
    Gene: PPS_4059
    Database cross-references and differences (RAF-indexed):
    • Uniprot F8G0M2 (0-254)
      • engineered mutation (93)
  • Chain 'C':
    Compound: Deformylase
    Species: Pseudomonas putida [TaxId:1042876]
    Gene: PPS_4059
    Database cross-references and differences (RAF-indexed):
    • Uniprot F8G0M2 (0-End)
      • engineered mutation (93)
  • Chain 'D':
    Compound: Deformylase
    Species: Pseudomonas putida [TaxId:1042876]
    Gene: PPS_4059
    Database cross-references and differences (RAF-indexed):
    • Uniprot F8G0M2 (0-End)
      • engineered mutation (93)
  • Chain 'E':
    Compound: Deformylase
    Species: Pseudomonas putida [TaxId:1042876]
    Gene: PPS_4059
    Database cross-references and differences (RAF-indexed):
    • Uniprot F8G0M2 (0-254)
      • engineered mutation (93)
  • Chain 'F':
    Compound: Deformylase
    Species: Pseudomonas putida [TaxId:1042876]
    Gene: PPS_4059
    Database cross-references and differences (RAF-indexed):
    • Uniprot F8G0M2
      • engineered mutation (93)
  • Chain 'G':
    Compound: Deformylase
    Species: Pseudomonas putida [TaxId:1042876]
    Gene: PPS_4059
    Database cross-references and differences (RAF-indexed):
    • Uniprot F8G0M2
      • engineered mutation (93)
  • Chain 'H':
    Compound: Deformylase
    Species: Pseudomonas putida [TaxId:1042876]
    Gene: PPS_4059
    Database cross-references and differences (RAF-indexed):
    • Uniprot F8G0M2 (Start-254)
      • engineered mutation (93)
  • Heterogens: ACY, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >4l0cA (A:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavsnr

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >4l0cB (B:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavsnr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4l0cC (C:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavsnr

    Sequence, based on observed residues (ATOM records):
    >4l0cC (C:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavs

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4l0cD (D:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavsnr

    Sequence, based on observed residues (ATOM records):
    >4l0cD (D:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavs

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >4l0cE (E:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavsnr

  • Chain 'F':
    Sequence, based on SEQRES records:
    >4l0cF (F:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavsnr

    Sequence, based on observed residues (ATOM records):
    >4l0cF (F:)
kgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrgl
sesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdppv
sgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavkt
afdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveaghmipw
dnlegfitavsn

  • Chain 'G':
    Sequence, based on SEQRES records:
    >4l0cG (G:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavsnr

    Sequence, based on observed residues (ATOM records):
    >4l0cG (G:)
kgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrgl
sesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdppv
sgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavkt
afdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmip
wdnlegfitavs

  • Chain 'H':
    Sequence, based on SEQRES records:
    >4l0cH (H:)
mkgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrg
lsesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdpp
vsgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavk
tafdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmi
pwdnlegfitavsnr

    Sequence, based on observed residues (ATOM records):
    >4l0cH (H:)
kgynvyangirqhiihfpgtgsplllipgitspavtwgfvaerlakyfdvhvvdvrgrgl
sesgdldysldamaddlvalaqrmegvvvlghamgariairaarkdsqvfsrlilvdppv
sgpgrrpypakwswyaesirlaqrgctamemrsycptwtdeqielraewlhtcqytavkt
afdgfhtddihtdlaqltlpiqlvvaggaeviqpddiaeiislapqtttyvveeaghmip
wdnlegfitavsnr