PDB entry 4kw1

View 4kw1 on RCSB PDB site
Description: Structure of a/egypt/n03072/2010 h5 ha
Class: viral protein
Keywords: viral protein
Deposited on 2013-05-23, released 2014-06-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.194
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1071165]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4kw1a_
  • Chain 'B':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1071165]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot G1JUF7
      • conflict (174)
    Domains in SCOPe 2.07: d4kw1b1, d4kw1b2
  • Chain 'C':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1071165]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4kw1c_
  • Chain 'D':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1071165]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4kw1d_
  • Chain 'E':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1071165]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4kw1e_
  • Chain 'F':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1071165]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot G1JUF7
      • conflict (174-175)
    Domains in SCOPe 2.07: d4kw1f1, d4kw1f2
  • Chain 'G':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1071165]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4kw1g_
  • Chain 'H':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1071165]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot G1JUF7
      • conflict (174-175)
    Domains in SCOPe 2.07: d4kw1h1, d4kw1h2
  • Heterogens: NAG, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4kw1A (A:)
adpgdqicigyhannsteqvdtimeknvtvthaqdilekthngklcnldgvkplilrdcs
vagwllgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqi
ipksswsdheasgvssvcpyqgrssffrnvvwltkkdnayptikrsynntnqedllvlwg
ihhpndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilksnd
ainfesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihpl
tigecpkyvksnrlvlatglrnspqgetr

    Sequence, based on observed residues (ATOM records): (download) 
    >4kw1A (A:)
dqicigyhannsteqvdtimeknvtvthaqdilekthngklcnldgvkplilrdcsvagw
llgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqiipks
swsdheasgvssvcpyqgrssffrnvvwltkkdnayptikrsynntnqedllvlwgihhp
ndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilksndainf
esngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihpltige
cpkyvksnrlvlatglrnspq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4kw1B (B:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhrcdnecmesvrngtydypqyseearlkreeissgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4kw1B (B:)
eggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmntqfeavgref
nnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlydkvrlqlrdna
kelgngcfefyhrcdnecmesvrngtydypqyseearlkreeiss

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4kw1C (C:)
adpgdqicigyhannsteqvdtimeknvtvthaqdilekthngklcnldgvkplilrdcs
vagwllgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqi
ipksswsdheasgvssvcpyqgrssffrnvvwltkkdnayptikrsynntnqedllvlwg
ihhpndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilksnd
ainfesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihpl
tigecpkyvksnrlvlatglrnspqgetr

    Sequence, based on observed residues (ATOM records): (download) 
    >4kw1C (C:)
dqicigyhannsteqvdtimeknvtvthaqdilekthngklcnldgvkplilrdcsvagw
llgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqiipks
swsdheasgvssvcsffrnvvwltkkdnayptikrsynntnqedllvlwgihhpndaaeq
trlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilksndainfesngnf
iapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihpltigecpkyvk
snrlvlatglrnsp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4kw1D (D:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhrcdnecmesvrngtydypqyseearlkreeissgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4kw1D (D:)
ieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmntqfeavgre
fnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlydkvrlqlrdn
akelgngcfefyhrcdnecmesvrngtyyseearlkreeis

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4kw1E (E:)
adpgdqicigyhannsteqvdtimeknvtvthaqdilekthngklcnldgvkplilrdcs
vagwllgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqi
ipksswsdheasgvssvcpyqgrssffrnvvwltkkdnayptikrsynntnqedllvlwg
ihhpndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilksnd
ainfesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihpl
tigecpkyvksnrlvlatglrnspqgetr

    Sequence, based on observed residues (ATOM records): (download) 
    >4kw1E (E:)
dqicigyhannsteqvdtimeknvtvthaqdilekthngklcnldgvkplilrdcsvagw
llgnpmcdeflnvpewsyivekgnfndyeelkhllsrinhfekiqiipksswsdheasgv
ssffrnvvwltkkdnayptikrsynntnqedllvlwgihhpndaaeqtrlyqnpttyisv
gtstlnqrlvpkiatrskvngqsgrmeffwtilksndainfesngnfiapenaykivkkg
dstimkseleygncntkcqtpigainssmpfhnihpltigecpkyvksnrlvlatglrns
p

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4kw1F (F:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhrcdnecmesvrngtydypqyseearlkreeissgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4kw1F (F:)
ieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmntqfeavgre
fnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlydkvrlqlrdn
akelgngcfefyhrcdnecmesvrngtyseearlkreeissg

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4kw1G (G:)
adpgdqicigyhannsteqvdtimeknvtvthaqdilekthngklcnldgvkplilrdcs
vagwllgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqi
ipksswsdheasgvssvcpyqgrssffrnvvwltkkdnayptikrsynntnqedllvlwg
ihhpndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilksnd
ainfesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihpl
tigecpkyvksnrlvlatglrnspqgetr

    Sequence, based on observed residues (ATOM records): (download) 
    >4kw1G (G:)
dqicigyhannsteqvdtimeknvtvthaqdilekthngklcnldgvkplilrdcsvagw
llgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqiipks
swsdheasgvsffrnvvwltkkdnayptikrsynntnqedllvlwgihhpndaaeqtrly
qnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilksndainfesngnfiape
naykivkkgdstimkseleygncntkcqtpigainssmpfhnihpltigecpkyvksnrl
vlatglrnsp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4kw1H (H:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhrcdnecmesvrngtydypqyseearlkreeissgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4kw1H (H:)
ggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmntqfeavgrefn
nlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlydkvrlqlrdnak
elgngcfefyhrcdnecmesvrngtydypqyseearlkreeissg