PDB entry 4kt0

View 4kt0 on RCSB PDB site
Description: Crystal structure of a virus like photosystem I from the cyanobacterium Synechocystis PCC 6803
Class: electron transport
Keywords: photosynthetic reaction center, membrane complex, plastocyanin, cytochrome C6, Ferredoxin, ELECTRON TRANSPORT
Deposited on 2013-05-19, released 2014-02-05
The last revision prior to the SCOPe 2.04 freeze date was dated 2014-02-05, with a file datestamp of 2014-01-31.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.2
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: photosystem I p700 chlorophyll a apoprotein a1
    Species: Synechocystis sp. PCC 6803 [TaxId:1148]
    Gene: BEST7613_2234, MYO_18690, psaA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4kt0a_
  • Chain 'B':
    Compound: photosystem I p700 chlorophyll a apoprotein a2
    Species: SYNECHOCYSTIS SP. PCC 6803 [TaxId:1148]
    Gene: psaB, BEST7613_2235, MYO_18700
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4kt0b_
  • Chain 'C':
    Compound: photosystem I iron-sulfur center
    Species: SYNECHOCYSTIS SP. PCC 6803 [TaxId:1148]
    Gene: psaC, BEST7613_5694, MYO_120930
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4kt0c_
  • Chain 'D':
    Compound: Photosystem I subunit II
    Species: SYNECHOCYSTIS SP. PCC 6803 [TaxId:1148]
    Gene: psaD, BEST7613_1459, MYO_11100
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4kt0d_
  • Chain 'E':
    Compound: photosystem I reaction center subunit IV
    Species: SYNECHOCYSTIS SP. PCC 6803 [TaxId:1148]
    Gene: psaE, BEST7613_5968, MYO_118260
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4kt0e_
  • Chain 'F':
    Compound: Photosystem I subunit III
    Species: SYNECHOCYSTIS SP. PCC 6803 [TaxId:1148]
    Gene: psaF, BEST7613_2928
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4kt0f_
  • Chain 'J':
    Compound: Photosystem I reaction center subunit IX
    Species: SYNECHOCYSTIS SP. PCC 6803 [TaxId:1148]
    Gene: psaJ, BEST7613_2927, MYO_115450
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4kt0j_
  • Chain 'K':
    Compound: Photosystem I reaction center subunit PsaK
    Species: SYNECHOCYSTIS SP. PCC 6803 [TaxId:1148]
    Gene: psaK, BEST7613_4536, MYO_129960
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: Photosystem I reaction center subunit XII
    Species: SYNECHOCYSTIS SP. PCC 6803 [TaxId:1148]
    Gene: psbM, psaM, BEST7613_1787, MYO_14340
    Database cross-references and differences (RAF-indexed):
  • Heterogens: PQN, SF4, LHG, CL0, BCR, CLA, LMU, LMG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4kt0A (A:)
mtisppereakakvsvdnnpvptsfekwgkpghfdrtlargpktttwiwnlhanahdfds
qtsdledvsrkifsahfghlavvfvwlsgmyfhgakfsnyegwladpthikpsaqvvwpi
vgqgilngdvgggfhgiqitsglfylwrasgftdsyqlyctaigglvmaalmlfagwfhy
hvkapklewfqnvesmmnhhlagllglgslgwaghqihvsmpinklldagvapkdiplph
efilepskmaelypsfaqgltpfftlnwgvysdfltfkgglnpvtgglwlsdtahhhlai
avlfiiaghmyrtnwgighsmkeileahkgpftgeghkglyeilttswhaqlainlallg
sltiivaqhmyamppypyqaidyatqlslfthhmwiggflivgagahgaifmvrdydpak
nvnnlldrmlrhrdaiishlnwvciflgfhsfglyihndtmralgrpqdmfsdtaiqlqp
ifaqwvqhlhtlapgatapnalatasyafggetiavagkvammpitlgtadfmvhhihaf
tihvtalillkgvlyarssrlvpdkanlgfrfpcdgpgrggtcqvsgwdhvflglfwmyn
slsivifhfswkmqsdvwgtvspdgsvthvtlgnfaqsaitingwlrdflwaqaanvins
ygsalsaygimflaghfvfafslmflfsgrgywqeliesivwahnklnvapaiqpralsi
iqgravgvahyllggivttwafflarslsig

    Sequence, based on observed residues (ATOM records): (download) 
    >4kt0A (A:)
kvsvdnnpvptsfekwgkpghfdrtlargpktttwiwnlhanahdfdsqtsdledvsrki
fsahfghlavvfvwlsgmyfhgakfsnyegwladpthikpsaqvvwpivgqgilngdvgg
gfhgiqitsglfylwrasgftdsyqlyctaigglvmaalmlfagwfhyhvkapklewfqn
vesmmnhhlagllglgslgwaghqihvsmpinklldagvapkdiplphefilepskmael
ypsfaqgltpfftlnwgvysdfltfkgglnpvtgglwlsdtahhhlaiavlfiiaghmyr
tnwgighsmkeileahkgpftgeghkglyeilttswhaqlainlallgsltiivaqhmya
mppypyqaidyatqlslfthhmwiggflivgagahgaifmvrdydpaknvnnlldrmlrh
rdaiishlnwvciflgfhsfglyihndtmralgrpqdmfsdtaiqlqpifaqwvqhlhtl
apgatapnalatasyafggetiavagkvammpitlgtadfmvhhihaftihvtalillkg
vlyarssrlvpdkanlgfrfpcdgpgrggtcqvsgwdhvflglfwmynslsivifhfswk
mqsdvwgtvspdgsvthvtlgnfaqsaitingwlrdflwaqaanvinsygsalsaygimf
laghfvfafslmflfsgrgywqeliesivwahnklnvapaiqpralsiiqgravgvahyl
lggivttwafflarslsig

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4kt0B (B:)
matkfpkfsqdlaqdpttrriwygiatahdfethdgmteenlyqkifashfghiaiiflw
tsgtlfhvawqgnfeqwikdplnirpiahaiwdphfgegavnaftqagasnpvniaysgv
yhwfytigmttnqelysgavfllvlaslflfagwlhlqpkfrpslawfknaesrlnhhla
glfgvsslawaghlvhvaipeargqhvgwdnflstpphpaglmpfftgnwgvyaadpdta
ghifgtsegagtailtflggfhpqteslwltdiahhhlaiavifiiaghmyrtnwgighs
ikeilnahkgpltgaghtnlydtinnslhfqlglalaslgvitslvaqhmyslpsyafia
qdhttqaalythhqyiagflmvgafahgaiffvrdydpvankdnvlarmlehkealishl
swvslflgfhtlglyvhndvvvafgtpekqiliepvfaqwiqatsgkalygfdvllsnpd
siasttgaawlpgwldainsgtnslfltigpgdflvhhaialglhttalilikgaldarg
sklmpdkkdfgysfpcdgpgrggtcdisawdafylamfwmlntlgwltfywhwkhlgvws
gnvaqfnenstylmgwfrdylwansaqlingynpygvnnlsvwawmflfghlvwatgfmf
liswrgywqelietivwahertplanlvrwkdkpvalsivqarlvglahftvgyvltyaa
fliastagkfg

    Sequence, based on observed residues (ATOM records): (download) 
    >4kt0B (B:)
tkfpkfsqdlaqdpttrriwygiatahdfethdgmteenlyqkifashfghiaiiflwts
gtlfhvawqgnfeqwikdplnirpiahaiwdphfgegavnaftqagasnpvniaysgvyh
wfytigmttnqelysgavfllvlaslflfagwlhlqpkfrpslawfknaesrlnhhlagl
fgvsslawaghlvhvaipeargqhvgwdnflstpphpaglmpfftgnwgvyaadpdtagh
ifgtsegagtailtflggfhpqteslwltdiahhhlaiavifiiaghmyrtnwgighsik
eilnahkgpltgaghtnlydtinnslhfqlglalaslgvitslvaqhmyslpsyafiaqd
httqaalythhqyiagflmvgafahgaiffvrdydpvankdnvlarmlehkealishlsw
vslflgfhtlglyvhndvvvafgtpekqiliepvfaqwiqatsgkalygfdvllsnpdsi
asttgaawlpgwldainsgtnslfltigpgdflvhhaialglhttalilikgaldargsk
lmpdkkdfgysfpcdgpgrggtcdisawdafylamfwmlntlgwltfywhwkhlgvwsgn
vaqfnenstylmgwfrdylwansaqlingynpygvnnlsvwawmflfghlvwatgfmfli
swrgywqelietivwahertplanlvrwkdkpvalsivqarlvglahftvgyvltyaafl
iastagkf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4kt0C (C:)
mshsvkiydtcigctqcvracpldvlemvpwdgckaaqiassprtedcvgckrcetacpt
dflsirvylgaettrsmglay

    Sequence, based on observed residues (ATOM records): (download) 
    >4kt0C (C:)
shsvkiydtcigctqcvracpldvlemvpwdgckaaqiassprtedcvgckrcetacptd
flsirvylgaettrsmglay

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4kt0D (D:)
mtelsgqppkfggstggllskanreekyaitwtsaseqvfemptggaaimnegenllyla
rkeqclalgtqlrtkfkpkiqdykiyrvypsgevqylhpadgvfpekvnegreaqgtktr
rigqnpepvtikfsgkapyev

    Sequence, based on observed residues (ATOM records): (download) 
    >4kt0D (D:)
elsgqppkfggstggllskanreekyaitwtsaseqvfemptggaaimnegenllylark
eqclalgtqlrtkfkpkiqdykiyrvypsgevqylhpadgvfpekvnegreaqgtktrri
gqnpepvtikfsgkapye

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4kt0E (E:)
malnrgdkvrikrtesywygdvgtvasveksgilypvivrfdrvnyngfsgsasgvntnn
faenelelvqaaak

    Sequence, based on observed residues (ATOM records): (download) 
    >4kt0E (E:)
alnrgdkvrikrtesywygdvgtvasveksgilypvivrfdrvnyngfsgsasgvntnnf
aenelelv

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4kt0F (F:)
mkhllalllaftlwfnfapsasaddfanltpcsenpaylaksknflnttndpnsgkirae
ryasalcgpegyphlivdgrfthagdflipsilflyiagwigwvgrsylieiresknpem
qevvinvplaikkmlggflwplaavgeytsgklvmkdseiptspr

    Sequence, based on observed residues (ATOM records): (download) 
    >4kt0F (F:)
dfanltpcsenpaylaksknflnttndpnsgkiraeryasalcgpegyphlivdgrftha
gdflipsilflyiagwigwvgrsylieiresknpemqevvinvplaikkmlggflwplaa
vgeytsgklvmkdseiptspr

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4kt0J (J:)
mdglksflstapvmimalltftagiliefnrfypdllfhp

  • Chain 'K':
    No sequence available.

  • Chain 'M':
    No sequence available.