PDB entry 4kqo

View 4kqo on RCSB PDB site
Description: Crystal structure of penicillin-binding protein 3 from pseudomonas aeruginosa in complex with piperacillin
Class: Biosynthetic Protein/Antibiotic
Keywords: PENICILLIN-BINDING PROTEINS, PIPERACILLIN, CELL WALL BIOSYNTHESIS, TRANSPEPTIDASE, OUT PERIPLASMIC MEMBRANE, Biosynthetic Protein-Antibiotic complex
Deposited on 2013-05-15, released 2013-11-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2013-11-06, with a file datestamp of 2013-11-01.
Experiment type: XRAY
Resolution: 2.31 Å
R-factor: 0.219
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: penicillin-binding protein 3
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: ftsI, PA4418
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4kqoa1, d4kqoa2
  • Chain 'B':
    Compound: penicillin-binding protein 3
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: ftsI, PA4418
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4kqob1, d4kqob2
  • Heterogens: JPP, GOL, IMD, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4kqoA (A:)
    mahhhhhhssglevlfqgpdlhvidhdflkgqgdarsvrhiaipahrglitdrngeplav
    stpvttlwanpkelmtakerwpqlaaalgqdtklfadrieqnaerefiylvrgltpeqge
    gvialkvpgvysieefrrfypagevvahavgftdvddrgregielafdewlagvpgkrqv
    lkdrrgrvikdvqvtknakpgktlalsidlrlqylahrelrnallengakagslvimdvk
    tgeilamtnqptynpnnrrnlqpaamrnramidvfepgstvkpfsmsaalasgrwkpsdi
    vdvypgtlqigrytirdvsrnsrqldltgilikssnvgiskiafdigaesiysvmqqvgl
    gqdtglgfpgervgnlpnhrkwpkaetatlaygyglsvtaiqlahayaalandgksvpls
    mtrvdrvpdgvqvispevastvqgmlqqvveaqggvfraqvpgyhaagksgtarkvsvgt
    kgyrenayrslfagfapatdpriamvvvidepskagyfgglvsapvfskvmagalrlmnv
    ppdnlptateqqqvnaapakggrg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4kqoA (A:)
    arsvrhiaipahrglitdrngeplavstpvttlwanpkelmtakerwpqlaaalgqdtkl
    fadrieqnaerefiylvrgltpeqgegvialkvpgvysieefrrfypagevvahavgftd
    vddrgregielafdewlagvpgkrqvlkdrrgrvikdvqvtknakpgktlalsidlrlqy
    lahrelrnallengakagslvimdvktgeilamtnqptynpnnrrnlqpaamrnramidv
    fepgstvkpfsmsaalasgrwkpsdivdvypgtlqigrytirdvsrnsrqldltgiliks
    snvgiskiafdigaesiysvmqqvglgqdtglgfpgervgnlpnhrkwpkaetatlaygy
    glsvtaiqlahayaalandgksvplsmtrvdrvpdgvqvispevastvqgmlqqvveaqg
    gvfraqvpgyhaagksgtarkvsvgtkgyrenayrslfagfapatdpriamvvvidepsk
    agyfgglvsapvfskvmagalrlmnvppdnlpt
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4kqoB (B:)
    mahhhhhhssglevlfqgpdlhvidhdflkgqgdarsvrhiaipahrglitdrngeplav
    stpvttlwanpkelmtakerwpqlaaalgqdtklfadrieqnaerefiylvrgltpeqge
    gvialkvpgvysieefrrfypagevvahavgftdvddrgregielafdewlagvpgkrqv
    lkdrrgrvikdvqvtknakpgktlalsidlrlqylahrelrnallengakagslvimdvk
    tgeilamtnqptynpnnrrnlqpaamrnramidvfepgstvkpfsmsaalasgrwkpsdi
    vdvypgtlqigrytirdvsrnsrqldltgilikssnvgiskiafdigaesiysvmqqvgl
    gqdtglgfpgervgnlpnhrkwpkaetatlaygyglsvtaiqlahayaalandgksvpls
    mtrvdrvpdgvqvispevastvqgmlqqvveaqggvfraqvpgyhaagksgtarkvsvgt
    kgyrenayrslfagfapatdpriamvvvidepskagyfgglvsapvfskvmagalrlmnv
    ppdnlptateqqqvnaapakggrg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4kqoB (B:)
    ipahrglitdrngeplavstpvttlwanpkelmtakerwpqlaaalgqdtklfadrieqn
    aerefiylvrgltpeqgegvialkvpgvysieefrrfypagevvahavgftdvddrgreg
    ielafdewlagvpgkvtknakpgktlalsidlrlqylahrelrnallengakagslvimd
    vktgeilamtnqptynpnnrrnlqpaamrnramidvfepgstvkpfsmsaalasgrwkps
    divdvypgtlqigrytirdvsrnsrqldltgilikssnvgiskiafdigaesiysvmqqv
    glgqdtglgfpgervgnlpnhrkwpkaetatlaygyglsvtaiqlahayaalandgksvp
    lsmtrvdrvpdgvqvispevastvqgmlqqvveaqggvfraqvpgyhaagksgtarkvsv
    gtkgyrenayrslfagfapatdpriamvvvidepskagyfgglvsapvfskvmagalrlm
    nvppdnlpta