PDB entry 4jyk
View 4jyk on RCSB PDB site
Description: Structure of E. coli Transcriptional Regulator RutR with bound uracil
Class: transcription regulator
Keywords: Structural Genomics, PSI-Biology, New York Structural Genomics Research Consortium, NYSGRC, Helix-turn-Helix, Transcriptional Regulator, TRANSCRIPTION REGULATOR
Deposited on
2013-03-29, released
2013-08-14
The last revision prior to the SCOPe 2.05 freeze date was dated
2013-08-14, with a file datestamp of
2013-08-09.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.122
AEROSPACI score: 0.64
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: HTH-type transcriptional regulator rutR
Species: Escherichia coli [TaxId:83333]
Gene: b1013, JW0998, rutR, ycdC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4jyka1, d4jyka2 - Chain 'B':
Compound: HTH-type transcriptional regulator rutR
Species: Escherichia coli [TaxId:83333]
Gene: b1013, JW0998, rutR, ycdC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4jykb1, d4jykb2 - Heterogens: SO4, URA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4jykA (A:)
mtqgavkttgkrsravsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfp
skealyiavlrqildiwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmeml
agapllmdeltgdlkalideksaliagwvksgklapidpqhlifmiwastqhyadfapqv
eavtgatlrdevffnqtvenvqriiiegirpr
Sequence, based on observed residues (ATOM records): (download)
>4jykA (A:)
rsravsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfpskealyiavlr
qildiwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmemlagapllmdelt
gdlkalideksaliagwvksgklapidpqhlifmiwastqhyadfapqveavtgatlrde
vffnqtvenvqriiiegirpr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4jykB (B:)
mtqgavkttgkrsravsakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfp
skealyiavlrqildiwlaplkafredfaplaaikeyirlklevsrdypqasrlfcmeml
agapllmdeltgdlkalideksaliagwvksgklapidpqhlifmiwastqhyadfapqv
eavtgatlrdevffnqtvenvqriiiegirpr
Sequence, based on observed residues (ATOM records): (download)
>4jykB (B:)
sakkkailsaaldtfsqfgfhgtrleqiaelagvsktnllyyfpskealyiavlrqildi
wlaplkafredfaplaaikeyirlklevsrdypqasrlfcmemlagapllmdeltgdlka
lideksaliagwvksgklapidpqhlifmiwastqhyadfapqveavtgatlrdevffnq
tvenvqriiiegirpr