PDB entry 4jka
View 4jka on RCSB PDB site
Description: Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Co ion
Class: RNA binding protein
Keywords: metalloprotein, conformational change, RNA BINDING PROTEIN
Deposited on
2013-03-09, released
2013-05-22
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-11-20, with a file datestamp of
2019-11-15.
Experiment type: XRAY
Resolution: 1.32 Å
R-factor: N/A
AEROSPACI score: 0.58
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Pre-mRNA-processing-splicing factor 8
Species: Homo sapiens [TaxId:9606]
Gene: PRP8, PRPC8, PRPF8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4jkaa_ - Chain 'B':
Compound: Pre-mRNA-processing-splicing factor 8
Species: Homo sapiens [TaxId:9606]
Gene: PRP8, PRPC8, PRPF8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4jkab_ - Heterogens: CO, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4jkaA (A:)
gelfsnqiiwfvddtnvyrvtihktfegnlttkpingaififnprtgqlflkiihtsvwa
gqkrlgqlakwktaeevaalirslpveeqpkqiivtakgmldplevhlldfpnivikgse
lqlpfqaclkvekfgdlilkatepqmvlfnlyddwlktissytafsrlililralhvnnd
rakvilkpdkttitephhiwptltdeewikvevqlkdlilad
Sequence, based on observed residues (ATOM records): (download)
>4jkaA (A:)
lfsnqiiwfvddtnvyrvtihktfegnlttkpingaififnprtgqlflkiihtsvwagq
krlgqlakwktaeevaalirslpveeqpkqiivtakgmldplevhlldfpnivikgselq
lpfqaclkvekfgdlilkatepqmvlfnlyddwlktissytafsrlililralhvnndra
kvilkpdkttitephhiwptltdeewikvevqlkdlilad
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4jkaB (B:)
gelfsnqiiwfvddtnvyrvtihktfegnlttkpingaififnprtgqlflkiihtsvwa
gqkrlgqlakwktaeevaalirslpveeqpkqiivtakgmldplevhlldfpnivikgse
lqlpfqaclkvekfgdlilkatepqmvlfnlyddwlktissytafsrlililralhvnnd
rakvilkpdkttitephhiwptltdeewikvevqlkdlilad
Sequence, based on observed residues (ATOM records): (download)
>4jkaB (B:)
elfsnqiiwfvddtnvyrvtihktfegnlttkpingaififnprtgqlflkiihtsvwag
qkrlgqlakwktaeevaalirslpveeqpkqiivtakgmldplevhlldfpnivikgsel
qlpfqaclkvekfgdlilkatepqmvlfnlyddwlktissytafsrlililralhvnndr
akvilkpdkttitephhiwptltdeewikvevqlkdlila