PDB entry 4jk8
View 4jk8 on RCSB PDB site
Description: Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Mg ion
Class: RNA binding protein
Keywords: metalloprotein, conformational change, RNA BINDING PROTEIN
Deposited on
2013-03-09, released
2013-05-22
The last revision prior to the SCOPe 2.07 freeze date was dated
2013-06-26, with a file datestamp of
2013-06-21.
Experiment type: XRAY
Resolution: 1.15 Å
R-factor: 0.141
AEROSPACI score: 0.9
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Pre-mRNA-processing-splicing factor 8
Species: Homo sapiens [TaxId:9606]
Gene: PRP8, PRPC8, PRPF8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4jk8a_ - Chain 'B':
Compound: Pre-mRNA-processing-splicing factor 8
Species: Homo sapiens [TaxId:9606]
Gene: PRP8, PRPC8, PRPF8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4jk8b_ - Heterogens: GOL, CL, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4jk8A (A:)
gelfsnqiiwfvddtnvyrvtihktfegnlttkpingaififnprtgqlflkiihtsvwa
gqkrlgqlakwktaeevaalirslpveeqpkqiivtakgmldplevhlldfpnivikgse
lqlpfqaclkvekfgdlilkatepqmvlfnlyddwlktissytafsrlililralhvnnd
rakvilkpdkttitephhiwptltdeewikvevqlkdlilad
Sequence, based on observed residues (ATOM records): (download)
>4jk8A (A:)
lfsnqiiwfvddtnvyrvtihktfegnlttkpingaififnprtgqlflkiihtsvwagq
krlgqlakwktaeevaalirslpveeqpkqiivtakgmldplevhlldfpnivikgselq
lpfqaclkvekfgdlilkatepqmvlfnlyddwlktissytafsrlililralhvnndra
kvilkpdkttitephhiwptltdeewikvevqlkdlilad
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4jk8B (B:)
gelfsnqiiwfvddtnvyrvtihktfegnlttkpingaififnprtgqlflkiihtsvwa
gqkrlgqlakwktaeevaalirslpveeqpkqiivtakgmldplevhlldfpnivikgse
lqlpfqaclkvekfgdlilkatepqmvlfnlyddwlktissytafsrlililralhvnnd
rakvilkpdkttitephhiwptltdeewikvevqlkdlilad
Sequence, based on observed residues (ATOM records): (download)
>4jk8B (B:)
elfsnqiiwfvddtnvyrvtihktfegnlttkpingaififnprtgqlflkiihtsvwag
qkrlgqlakwktaeevaalirslpveeqpkqiivtakgmldplevhlldfpnivikgsel
qlpfqaclkvekfgdlilkatepqmvlfnlyddwlktissytafsrlililralhvnndr
akvilkpdkttitephhiwptltdeewikvevqlkdlilad