PDB entry 4jhd

View 4jhd on RCSB PDB site
Description: Crystal Structure of an Actin Dimer in Complex with the Actin Nucleator Cordon-Bleu
Class: structural protein/protein binding
Keywords: actin cytoskeleton, actin filament nucleator, nuclear actin, nucleation, tandem W domains, STRUCTURAL PROTEIN-PROTEIN BINDING complex
Deposited on 2013-03-04, released 2013-06-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-17, with a file datestamp of 2019-07-12.
Experiment type: XRAY
Resolution: 2.91 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Actin-5C
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Act5C, CG4027
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10987 (Start-383)
      • engineered mutation (212)
      • engineered mutation (251)
    Domains in SCOPe 2.08: d4jhda1, d4jhda2
  • Chain 'B':
    Compound: Actin-5C
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Act5C, CG4027
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10987 (Start-383)
      • engineered mutation (299)
      • engineered mutation (330)
    Domains in SCOPe 2.08: d4jhdb1, d4jhdb2
  • Chain 'C':
    Compound: Protein cordon-bleu
    Species: Mus musculus [TaxId:10090]
    Gene: Cobl, Kiaa0633
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NBX1
      • see remark 999 (38)
  • Chain 'D':
    Compound: Actin-5C
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Act5C, CG4027
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10987 (Start-383)
      • engineered mutation (212)
      • engineered mutation (251)
    Domains in SCOPe 2.08: d4jhdd1, d4jhdd2
  • Chain 'E':
    Compound: Actin-5C
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Act5C, CG4027
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10987 (Start-383)
      • engineered mutation (299)
      • engineered mutation (330)
    Domains in SCOPe 2.08: d4jhde1, d4jhde2
  • Chain 'F':
    Compound: Protein cordon-bleu
    Species: Mus musculus [TaxId:10090]
    Gene: Cobl, Kiaa0633
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NBX1
      • see remark 999 (38)
  • Heterogens: ANP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4jhdA (A:)
    mahhhhhhmcdeevaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkd
    syvgdeaqskrgiltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteapln
    pkanrekmtqimfetfntpamyvaiqavlslyasgrttgivldsgdgvshtvpiyegyal
    phailrldlagrdltdylmkiltergysfttteereivrdikeklcyvaldfeqemataa
    ssssleksyelkdgqvitignerfrcpealfqpsflgmeacgihettynsimkcdvdirk
    dlyantvlsggttmypgiadrmqkeitalapstmkikiiapperkysvwiggsilaslst
    fqqmwiskqeydesgpsivhrkcf
    

    Sequence, based on observed residues (ATOM records): (download)
    >4jhdA (A:)
    vaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaqskrgi
    ltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmtqimf
    etfntpamyvaiqavlslyasgrttgivldsgdgvshtvpiyegyalphailrldlagrd
    ltdylmkiltergysfttteereivrdikeklcyvaldfeqemataassssleksyelkd
    gqvitignerfrcpealfqpsflgmeacgihettynsimkcdvdirkdlyantvlsggtt
    mypgiadrmqkeitalapstmkikiiapperkysvwiggsilaslstfqqmwiskqeyde
    sgpsivhrkcf
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4jhdB (B:)
    mahhhhhhmcdeevaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkd
    syvgdeaqskrgiltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteapln
    pkanrekmtqimfetfntpamyvaiqavlslyasgrttgivldsgdgvshtvpiyegyal
    phailrldlagrdltdylmkiltergysftttaereivrdikeklcyvaldfeqemataa
    ssssleksyelpdgqvitignerfrcpealfqpsflgmeacgihettynsimkcdvdire
    dlyantvlsggttmypgiadrmqkeitalakstmkikiiapperkysvwiggsilaslst
    fqqmwiskqeydesgpsivhrkcf
    

    Sequence, based on observed residues (ATOM records): (download)
    >4jhdB (B:)
    vaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaqskrgi
    ltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmtqimf
    etfntpamyvaiqavlslyasgrttgivldsgdgvshtvpiyegyalphailrldlagrd
    ltdylmkiltergysftttaereivrdikeklcyvaldfeqemataassssleksyelpd
    gqvitignerfrcpealfqpsflgmeacgihettynsimkcdvdiredlyantvlsggtt
    mypgiadrmqkeitalakstmkikiiapperkysvwiggsilaslstfqqmwiskqeyde
    sgpsivhrkcf
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4jhdD (D:)
    mahhhhhhmcdeevaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkd
    syvgdeaqskrgiltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteapln
    pkanrekmtqimfetfntpamyvaiqavlslyasgrttgivldsgdgvshtvpiyegyal
    phailrldlagrdltdylmkiltergysfttteereivrdikeklcyvaldfeqemataa
    ssssleksyelkdgqvitignerfrcpealfqpsflgmeacgihettynsimkcdvdirk
    dlyantvlsggttmypgiadrmqkeitalapstmkikiiapperkysvwiggsilaslst
    fqqmwiskqeydesgpsivhrkcf
    

    Sequence, based on observed residues (ATOM records): (download)
    >4jhdD (D:)
    vaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaqskrgi
    ltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmtqimf
    etfntpamyvaiqavlslyasgrttgivldsgdgvshtvpiyegyalphailrldlagrd
    ltdylmkiltergysfttteereivrdikeklcyvaldfeqemataassssleksyelkd
    gqvitignerfrcpealfqpsflgmeacgihettynsimkcdvdirkdlyantvlsggtt
    mypgiadrmqkeitalapstmkikiiapperkysvwiggsilaslstfqqmwiskqeyde
    sgpsivhrkcf
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4jhdE (E:)
    mahhhhhhmcdeevaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkd
    syvgdeaqskrgiltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteapln
    pkanrekmtqimfetfntpamyvaiqavlslyasgrttgivldsgdgvshtvpiyegyal
    phailrldlagrdltdylmkiltergysftttaereivrdikeklcyvaldfeqemataa
    ssssleksyelpdgqvitignerfrcpealfqpsflgmeacgihettynsimkcdvdire
    dlyantvlsggttmypgiadrmqkeitalakstmkikiiapperkysvwiggsilaslst
    fqqmwiskqeydesgpsivhrkcf
    

    Sequence, based on observed residues (ATOM records): (download)
    >4jhdE (E:)
    vaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaqskrgi
    ltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmtqimf
    etfntpamyvaiqavlslyasgrttgivldsgdgvshtvpiyegyalphailrldlagrd
    ltdylmkiltergysftttaereivrdikeklcyvaldfeqemataassssleksyelpd
    gqvitignerfrcpealfqpsflgmeacgihettynsimkcdvdiredlyantvlsggtt
    mypgiadrmqkeitalakstmkikiiapperkysvwiggsilaslstfqqmwiskqeyde
    sgpsivhrkcf
    

  • Chain 'F':
    No sequence available.