PDB entry 4jge

View 4jge on RCSB PDB site
Description: Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum)
Class: fluorescent protein
Keywords: lanRFP, fluoresent proteins, beta-barrel, Gly-Tyr-Gly chromophore, cephalochordate, FLUORESCENT PROTEIN
Deposited on 2013-03-01, released 2013-09-18
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-09-18, with a file datestamp of 2013-09-13.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: 0.157
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Red fluorescent protein blFP-R5
    Species: Branchiostoma lanceolatum [TaxId:7740]
    Gene: blFP-R5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1PND0
      • engineered mutation (8)
      • chromophore (65)
    Domains in SCOPe 2.06: d4jgea_
  • Chain 'B':
    Compound: Red fluorescent protein blFP-R5
    Species: Branchiostoma lanceolatum [TaxId:7740]
    Gene: blFP-R5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1PND0 (Start-227)
      • engineered mutation (8)
      • chromophore (65)
    Domains in SCOPe 2.06: d4jgeb_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4jgeA (A:)
    mhhhhhhgsplpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwi
    lvpnigygfyqylpfpdgamspyqaamhdgsgyvmhrsmqfedgamlhsdhryiykgnhi
    kgefrltgsgfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdv
    qtnvtfgkpiaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia
    

    Sequence, based on observed residues (ATOM records): (download)
    >4jgeA (A:)
    splpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwilvpnigyg
    fyqylpfpdgamspyqaamhdggyvmhrsmqfedgamlhsdhryiykgnhikgefrltgs
    gfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdvqtnvtfgkp
    iaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdi
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4jgeB (B:)
    mhhhhhhgsplpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwi
    lvpnigygfyqylpfpdgamspyqaamhdgsgyvmhrsmqfedgamlhsdhryiykgnhi
    kgefrltgsgfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdv
    qtnvtfgkpiaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia
    

    Sequence, based on observed residues (ATOM records): (download)
    >4jgeB (B:)
    splpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwilvpnigyg
    fyqylpfpdgamspyqaamhdggyvmhrsmqfedgamlhsdhryiykgnhikgefrltgs
    gfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdvqtnvtfgkp
    iaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia