PDB entry 4jge
View 4jge on RCSB PDB site
Description: Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum)
Class: fluorescent protein
Keywords: lanRFP, fluoresent proteins, beta-barrel, Gly-Tyr-Gly chromophore, cephalochordate, FLUORESCENT PROTEIN
Deposited on
2013-03-01, released
2013-09-18
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-09-18, with a file datestamp of
2013-09-13.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: 0.157
AEROSPACI score: 0.51
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Red fluorescent protein blFP-R5
Species: Branchiostoma lanceolatum [TaxId:7740]
Gene: blFP-R5
Database cross-references and differences (RAF-indexed):
- Uniprot B1PND0
- engineered mutation (8)
- chromophore (65)
Domains in SCOPe 2.04: d4jgea_ - Chain 'B':
Compound: Red fluorescent protein blFP-R5
Species: Branchiostoma lanceolatum [TaxId:7740]
Gene: blFP-R5
Database cross-references and differences (RAF-indexed):
- Uniprot B1PND0 (Start-227)
- engineered mutation (8)
- chromophore (65)
Domains in SCOPe 2.04: d4jgeb_ - Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4jgeA (A:)
mhhhhhhgsplpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwi
lvpnigygfyqylpfpdgamspyqaamhdgsgyvmhrsmqfedgamlhsdhryiykgnhi
kgefrltgsgfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdv
qtnvtfgkpiaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia
Sequence, based on observed residues (ATOM records): (download)
>4jgeA (A:)
splpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwilvpnigyg
fyqylpfpdgamspyqaamhdggyvmhrsmqfedgamlhsdhryiykgnhikgefrltgs
gfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdvqtnvtfgkp
iaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdi
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4jgeB (B:)
mhhhhhhgsplpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwi
lvpnigygfyqylpfpdgamspyqaamhdgsgyvmhrsmqfedgamlhsdhryiykgnhi
kgefrltgsgfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdv
qtnvtfgkpiaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia
Sequence, based on observed residues (ATOM records): (download)
>4jgeB (B:)
splpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwilvpnigyg
fyqylpfpdgamspyqaamhdggyvmhrsmqfedgamlhsdhryiykgnhikgefrltgs
gfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdvqtnvtfgkp
iaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia