PDB entry 4jeo

View 4jeo on RCSB PDB site
Description: Crystal structure of red fluorescent protein lanRFPdam exposed to prolonged X-ray irradiation
Class: fluorescent protein
Keywords: lanRFP, red fluorescent protein, beta-barrel, Gly-Tyr-Gly chromophore, cephalochordate, FLUORESCENT PROTEIN
Deposited on 2013-02-27, released 2013-09-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2013-09-18, with a file datestamp of 2013-09-13.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.152
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Red fluorescent protein blFP-R5
    Species: Branchiostoma lanceolatum [TaxId:7740]
    Gene: blFP-R5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1PND0 (Start-227)
      • engineered mutation (8)
      • chromophore (65)
    Domains in SCOPe 2.08: d4jeoa_
  • Chain 'B':
    Compound: Red fluorescent protein blFP-R5
    Species: Branchiostoma lanceolatum [TaxId:7740]
    Gene: blFP-R5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1PND0 (Start-227)
      • engineered mutation (8)
      • chromophore (65)
    Domains in SCOPe 2.08: d4jeob_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4jeoA (A:)
mhhhhhhgsplpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwi
lvpnigygfyqylpfpdgamspyqaamhdgsgyvmhrsmqfedgamlhsdhryiykgnhi
kgefrltgsgfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdv
qtnvtfgkpiaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia

    Sequence, based on observed residues (ATOM records): (download) 
    >4jeoA (A:)
splpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwilvpnigyg
fyqylpfpdgamspyqaamhdgsgyvmhrsmqfedgamlhsdhryiykgnhikgefrltg
sgfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdvqtnvtfgk
piaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4jeoB (B:)
mhhhhhhgsplpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwi
lvpnigygfyqylpfpdgamspyqaamhdgsgyvmhrsmqfedgamlhsdhryiykgnhi
kgefrltgsgfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdv
qtnvtfgkpiaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia

    Sequence, based on observed residues (ATOM records): (download) 
    >4jeoB (B:)
splpathdlhisgsinghefdlegsgkgnakegyqelhlksnkgdlsfspwilvpnigyg
fyqylpfpdgamspyqaamhdgsgyvmhrsmqfedgamlhsdhryiykgnhikgefrltg
sgfpadgpvmtnsltaadwcvdkllypndntiigkfdwtytttsgkryqsdvqtnvtfgk
piaadilkkqpmfvfrkvelkhtktelnfkqwqkafqdia