SCOPe 2.04: Structural Classification of Proteins

PDB entry 4jcr

View 4jcr on RCSB PDB site
Description: ClpP1 N165D mutant from Listeria monocytogenes
Class: hydrolase
Keywords: Pathogenic bacteria, Virulence factor, regulation, CLP protease family, active catalytic triad, HYDROLASE
Deposited on 2013-02-22, released 2013-06-12
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-07-24, with a file datestamp of 2013-07-19.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.22
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcra_
Chain 'B':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrb_
Chain 'C':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrc_
Chain 'D':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrd_
Chain 'E':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcre_
Chain 'F':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrf_
Chain 'G':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrg_
Chain 'H':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrh_
Chain 'I':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcri_
Chain 'J':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrj_
Chain 'K':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrk_
Chain 'L':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrl_
Chain 'M':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrm_
Chain 'N':
Compound: ATP-dependent Clp protease proteolytic subunit
Species: Listeria monocytogenes [TaxId:169963]
Gene: clpP, lmo1138
Database cross-references and differences (RAF-indexed):
- Uniprot Q8Y7Y1 (Start-189)
  - engineered mutation (164)
Domains in SCOPe 2.04: d4jcrn_
Heterogens: HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>4jcrA (A:)
maentknenitniltqklidtrtvliygeinqelaedvskqllllesisndpitifinsq
gghveagdtihdmikfikptvkvvgtgwvasagitiylaaekenrfslpntrymihqpag
gvqgqsteieieakeiirmrerinrliaeatgqsyeqiskdtdrdfwlsvneakdygivn
eiienrdglkmaswshpqfek