PDB entry 4j5y
View 4j5y on RCSB PDB site
Description: Crystal structure of Hfq from Pseudomonas aeruginosa in complex with ATP
Class: RNA Binding protein
Keywords: LSM, RNA binding protein, RNA chaperone, sRNA, mRNA
Deposited on
2013-02-11, released
2013-07-31
The last revision prior to the SCOPe 2.08 freeze date was dated
2013-08-21, with a file datestamp of
2013-08-16.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.188
AEROSPACI score: 0.43
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Protein hfq
Species: Pseudomonas aeruginosa [TaxId:208964]
Gene: hfq, PA4944
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4j5ya_ - Chain 'B':
Compound: Protein hfq
Species: Pseudomonas aeruginosa [TaxId:208964]
Gene: hfq, PA4944
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4j5yb_ - Chain 'C':
Compound: Protein hfq
Species: Pseudomonas aeruginosa [TaxId:208964]
Gene: hfq, PA4944
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4j5yc_ - Chain 'D':
Compound: Protein hfq
Species: Pseudomonas aeruginosa [TaxId:208964]
Gene: hfq, PA4944
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4j5yd_ - Chain 'E':
Compound: Protein hfq
Species: Pseudomonas aeruginosa [TaxId:208964]
Gene: hfq, PA4944
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4j5ye_ - Chain 'F':
Compound: Protein hfq
Species: Pseudomonas aeruginosa [TaxId:208964]
Gene: hfq, PA4944
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4j5yf_ - Heterogens: ATP, NA, PEG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4j5yA (A:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna
Sequence, based on observed residues (ATOM records): (download)
>4j5yA (A:)
ghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvv
psrpvrlp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4j5yB (B:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna
Sequence, based on observed residues (ATOM records): (download)
>4j5yB (B:)
ghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvv
psrpvrlp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4j5yC (C:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna
Sequence, based on observed residues (ATOM records): (download)
>4j5yC (C:)
ghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvv
psrpvrlp
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4j5yD (D:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna
Sequence, based on observed residues (ATOM records): (download)
>4j5yD (D:)
hslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvrlps
- Chain 'E':
Sequence, based on SEQRES records: (download)
>4j5yE (E:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna
Sequence, based on observed residues (ATOM records): (download)
>4j5yE (E:)
ghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvv
psrpvrlp
- Chain 'F':
Sequence, based on SEQRES records: (download)
>4j5yF (F:)
mskghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvrlpsgdqpaepgna
Sequence, based on observed residues (ATOM records): (download)
>4j5yF (F:)
kghslqdpylntlrkervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistv
vpsrpvrlp