PDB entry 4j07

View 4j07 on RCSB PDB site
Description: Crystal structure of a PROBABLE RIBOFLAVIN SYNTHASE, BETA CHAIN RIBH (6,7-dimethyl-8-ribityllumazine synthase, DMRL synthase, Lumazine synthase) from Mycobacterium leprae
Class: transferase
Keywords: SSGCID, Mycobacterium leprae, 6,7-dimethyl-8-ribityllumazine synthase, DMRL synthase, Lumazine synthase, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, TRANSFERASE
Deposited on 2013-01-30, released 2013-03-06
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-03-06, with a file datestamp of 2013-03-01.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.21
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Mycobacterium leprae [TaxId:561304]
    Gene: MLBr00560, ribH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4j07a_
  • Chain 'B':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Mycobacterium leprae [TaxId:561304]
    Gene: MLBr00560, ribH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4j07b_
  • Chain 'C':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Mycobacterium leprae [TaxId:561304]
    Gene: MLBr00560, ribH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4j07c_
  • Chain 'D':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Mycobacterium leprae [TaxId:561304]
    Gene: MLBr00560, ribH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4j07d_
  • Chain 'E':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Mycobacterium leprae [TaxId:561304]
    Gene: MLBr00560, ribH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4j07e_
  • Heterogens: NA, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4j07A (A:)
mahhhhhhmgtleaqtqgpgsmsggagipevpgidasglrlgivastwhsricdallaga
rkvaadsgidgptvvrvlgaieipvvvqelarhhdavvalgvvirgdtphfdyvcnsvtq
gltrialdtstpvgngvlttntekqaldraglptsaedkgaqaaaaalttaltllnlrsr
i

    Sequence, based on observed residues (ATOM records): (download) 
    >4j07A (A:)
pevpgidasglrlgivastwhsricdallagarkvaadsgidgptvvrvlgaieipvvvq
elarhhdavvalgvvirgdtphfdyvcnsvtqgltrialdtstpvgngvlttntekqald
raglptsaedkgaqaaaaalttaltllnlrsr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4j07B (B:)
mahhhhhhmgtleaqtqgpgsmsggagipevpgidasglrlgivastwhsricdallaga
rkvaadsgidgptvvrvlgaieipvvvqelarhhdavvalgvvirgdtphfdyvcnsvtq
gltrialdtstpvgngvlttntekqaldraglptsaedkgaqaaaaalttaltllnlrsr
i

    Sequence, based on observed residues (ATOM records): (download) 
    >4j07B (B:)
gidasglrlgivastwhsricdallagarkvaadsgidgptvvrvlgaieipvvvqelar
hhdavvalgvvirgdtphfdyvcnsvtqgltrialdtstpvgngvlttntekqaldragl
ptsaedkgaqaaaaalttaltllnlrsr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4j07C (C:)
mahhhhhhmgtleaqtqgpgsmsggagipevpgidasglrlgivastwhsricdallaga
rkvaadsgidgptvvrvlgaieipvvvqelarhhdavvalgvvirgdtphfdyvcnsvtq
gltrialdtstpvgngvlttntekqaldraglptsaedkgaqaaaaalttaltllnlrsr
i

    Sequence, based on observed residues (ATOM records): (download) 
    >4j07C (C:)
gidasglrlgivastwhsricdallagarkvaadsgidgptvvrvlgaieipvvvqelar
hhdavvalgvvirgdtphfdyvcnsvtqgltrialdtstpvgngvlttntekqaldragl
ptsaedkgaqaaaaalttaltllnlrsri

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4j07D (D:)
mahhhhhhmgtleaqtqgpgsmsggagipevpgidasglrlgivastwhsricdallaga
rkvaadsgidgptvvrvlgaieipvvvqelarhhdavvalgvvirgdtphfdyvcnsvtq
gltrialdtstpvgngvlttntekqaldraglptsaedkgaqaaaaalttaltllnlrsr
i

    Sequence, based on observed residues (ATOM records): (download) 
    >4j07D (D:)
idasglrlgivastwhsricdallagarkvaadsgidgptvvrvlgaieipvvvqelarh
hdavvalgvvirgdtphfdyvcnsvtqgltrialdtstpvgngvlttntekqaldraglp
tsaedkgaqaaaaalttaltllnlrs

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4j07E (E:)
mahhhhhhmgtleaqtqgpgsmsggagipevpgidasglrlgivastwhsricdallaga
rkvaadsgidgptvvrvlgaieipvvvqelarhhdavvalgvvirgdtphfdyvcnsvtq
gltrialdtstpvgngvlttntekqaldraglptsaedkgaqaaaaalttaltllnlrsr
i

    Sequence, based on observed residues (ATOM records): (download) 
    >4j07E (E:)
idasglrlgivastwhsricdallagarkvaadsgidgptvvrvlgaieipvvvqelarh
hdavvalgvvirgdtphfdyvcnsvtqgltrialdtstpvgngvlttntekqaldraglp
tsaedkgaqaaaaalttaltllnlrsri