PDB entry 4izb

View 4izb on RCSB PDB site
Description: Crystal structure of DmdD, a crotonase superfamily enzyme that catalyzes the hydration and hydrolysis of methylthioacryloyl-CoA
Class: hydrolase
Keywords: ENOYL-COA HYDRATASE, HYDROLASE, Dimethyl-sulphoniopropionate (DMSP) METABOLISM, methylthioacryloyl-CoA (MTA-CoA), CROTONASE FOLD
Deposited on 2013-01-29, released 2013-06-05
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-06-05, with a file datestamp of 2013-05-31.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.135
AEROSPACI score: 0.68 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Enoyl-CoA hydratase/isomerase family protein
    Species: Ruegeria pomeroyi [TaxId:246200]
    Gene: dmdD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4izba_
  • Chain 'B':
    Compound: Enoyl-CoA hydratase/isomerase family protein
    Species: Ruegeria pomeroyi [TaxId:246200]
    Gene: dmdD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4izbb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4izbA (A:)
mtqdvtsgysnldldlrdngvcvvtlnrpdkrnaldvatieelvtffstahrkgvravvl
tgagdhfcagldlvehwkadrsaddfmhvclrwheafnkmeyggvpiiaalrgavvgggl
elasaahlrvmdqstyfalpegqrgiftgggatirvsdmigkyrmidmiltgrvyqgqea
adlglaqyitegssfdkameladkiasnlpltnfaicsaishmqnmsgldaayaeafvgg
ivntqpaarerleafanktaarvrpnslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4izbA (A:)
dvtsgysnldldlrdngvcvvtlnrpdkrnaldvatieelvtffstahrkgvravvltga
gdhfcagldlvehwkadrsaddfmhvclrwheafnkmeyggvpiiaalrgavvggglela
saahlrvmdqstyfalpegqrgiftgggatirvsdmigkyrmidmiltgrvyqgqeaadl
glaqyitegssfdkameladkiasnlpltnfaicsaishmqnmsgldaayaeafvggivn
tqpaa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4izbB (B:)
mtqdvtsgysnldldlrdngvcvvtlnrpdkrnaldvatieelvtffstahrkgvravvl
tgagdhfcagldlvehwkadrsaddfmhvclrwheafnkmeyggvpiiaalrgavvgggl
elasaahlrvmdqstyfalpegqrgiftgggatirvsdmigkyrmidmiltgrvyqgqea
adlglaqyitegssfdkameladkiasnlpltnfaicsaishmqnmsgldaayaeafvgg
ivntqpaarerleafanktaarvrpnslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4izbB (B:)
tqdvtsgysnldldlrdngvcvvtlnrpdkrnaldvatieelvtffstahrkgvravvlt
gagdhfcagldlvehwkadrsaddfmhvclrwheafnkmeyggvpiiaalrgavvgggle
lasaahlrvmdqstyfalpegqrgiftgggatirvsdmigkyrmidmiltgrvyqgqeaa
dlglaqyitegssfdkameladkiasnlpltnfaicsaishmqnmsgldaayaeafvggi
vntqpaarer