PDB entry 4iz9

View 4iz9 on RCSB PDB site
Description: Crystal structure of an acetate kinase from Mycobacterium avium bound to an unknown acid-ApCpp conjugate and manganese
Class: transferase
Keywords: Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID, AckA, propionate kinase, acid-kinase, ATP-dependent, non-hydrolyzable ATP analog, anomalous manganese signal, unknown conjugate, TRANSFERASE
Deposited on 2013-01-29, released 2013-02-20
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-02-20, with a file datestamp of 2013-02-15.
Experiment type: XRAY
Resolution: 1.98 Å
R-factor: 0.174
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: acetate kinase
    Species: Mycobacterium avium [TaxId:243243]
    Gene: ackA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4iz9a1, d4iz9a2
  • Heterogens: MN, APC, SIN, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4iz9A (A:)
    gpgsmvdgsdgarrvlvinsgssslkfqlvdpesgvaastgiverigeesspvpdhdaal
    rrafdmlagdgvdlntaglvavghrvvhggntfyrptvlddaviarlhelselaplhnpp
    allgievarrllpgiahvavfdtgffhdlppaaatyaidreladrwqirrygfhgtshry
    vseqaaafldrplrglkqivlhlgngcsasaiagtrpldtsmgltpleglvmgtrsgdid
    psvvsylchtagmgvddvesmlnhrsgvvglsgvrdfrrlreliesgdgaaqlaysvfth
    rlrkyigaylavlghtdvisftagigendaavrrdavsgmeelgivlderrnlpgakgar
    qisaddspitvlvvptneelaiardcvrvlgg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4iz9A (A:)
    dgarrvlvinsgssslkfqlvdpesgvaastgiverigespvpdhdaalrrafdmlagdg
    vdlntaglvavghrvvhggntfyrptvlddaviarlhelselaplhnppallgievarrl
    lpgiahvavfdtgffhdlppaaatyaidreladrwqirrygfhgtshryvseqaaafldr
    plrglkqivlhlgngcsasaiagtrpldtsmgltpleglvmgtrsgdidpsvvsylchta
    gmgvddvesmlnhrsgvvglsgvrdfrrlreliesgdgaaqlaysvfthrlrkyigayla
    vlghtdvisftagigendaavrrdavsgmeelgivlderrnlpgakgarqisaddspitv
    lvvptneelaiardcvrvlgg