PDB entry 4iw3

View 4iw3 on RCSB PDB site
Description: Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) in complex with elongation factor Tu (EF-Tu)
Class: metal binding protein/translation
Keywords: 2-oxoglutarate oxygenase, oxygen sensing, protein synthesis regulation, double-stranded beta helix, jellyroll fold, prolyl-4-hydroxylase, translation, METAL BINDING PROTEIN-TRANSLATION complex
Deposited on 2013-01-23, released 2014-01-29
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-10-01, with a file datestamp of 2014-09-26.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.171
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative uncharacterized protein
    Species: Pseudomonas putida [TaxId:160488]
    Gene: PP_5159
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4iw3a_
  • Chain 'B':
    Compound: elongation factor tu-a
    Species: Pseudomonas putida [TaxId:160488]
    Gene: PP_0440, tuf-1, tufA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4iw3b1, d4iw3b2, d4iw3b3
  • Chain 'J':
    Compound: Putative uncharacterized protein
    Species: Pseudomonas putida [TaxId:160488]
    Gene: PP_5159
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4iw3j_
  • Chain 'K':
    Compound: elongation factor tu-a
    Species: Pseudomonas putida [TaxId:160488]
    Gene: PP_0440, tuf-1, tufA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4iw3k1, d4iw3k2, d4iw3k3
  • Heterogens: MN, OGA, GDP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4iw3A (A:)
mgsshhhhhhssglvprgshmashispehpmlaavvddlathgwsqqahflpadlvrala
aecrrrdaegelnpagvgrgatqevretirgdqiqwidpgqaeacdqylaamdqlrlain
qglflgledfechfalyppgafyrrhldrfrdddrrmvsavlylnegwqphdggqlrmfl
adgvehdvepvagclvvflsgevphevlpagrerlsltgwfrrrgndpf

    Sequence, based on observed residues (ATOM records): (download) 
    >4iw3A (A:)
hpmlaavvddlathgwsqqahflpadlvralaaecrrrdaegelnpagvgrgatqevret
irgdqiqwidpgqaeacdqylaamdqlrlainqglflgledfechfalyppgafyrrhld
rfrdddrrmvsavlylnegwqphdggqlrmfladgvehdvepvagclvvflsgevphevl
pagrerlsltgwfrrrgndpf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4iw3B (B:)
mgsshhhhhhssglvprgshmasmtggqqmgrgsefmakekfdrslphvnvgtighvdhg
kttltaaltrvcsevfgsaivefdkidsapeekargitintahveynstirhyahvdcpg
hadyvknmitgaaqmdgailvcsaadgpmpqtrehillsrqvgvpyivvflnkadlvdda
ellelvemevrdllstydfpgddtpiiigsarmalegkddnemgttavkklvetldsyip
epvraidqpflmpiedvfsisgrgtvvtgriergivrvqdpleivglrdtttttctgvem
frklldegragencgvllrgtkrddvergqvlvkpgsvkphtkftaevyvlskeeggrht
pffkgyrpqfyfrttdvtgncelpegvemvmpgdniqmtvtliktiamedglrfairegg
rtvgagvvakiie

    Sequence, based on observed residues (ATOM records): (download) 
    >4iw3B (B:)
lphvnvgtighvdhgkttltaaltrvcsevfgskidsapeekargitintahveynstir
hyahvdcpghadyvknmitgaaqmdgailvcsaadgpmpqtrehillsrqvgvpyivvfl
nkadlvaellelvemevrdllstydfpgddtpiiigsarmalegkddnemgttavkklve
tldsyipepvraidqpflmpiedvfsisgrgtvvtgriergivrvqdpleivglrdtttt
tctgvemfrklldegragencgvllrgtkrddvergqvlvkpgsvkphtkftaevyvlsk
eeggrhtpffkgyrpqfyfrttdvtgncelpegvemvmpgdniqmtvtliktiamedglr
faireggrtvgagvvakiie

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >4iw3J (J:)
mgsshhhhhhssglvprgshmashispehpmlaavvddlathgwsqqahflpadlvrala
aecrrrdaegelnpagvgrgatqevretirgdqiqwidpgqaeacdqylaamdqlrlain
qglflgledfechfalyppgafyrrhldrfrdddrrmvsavlylnegwqphdggqlrmfl
adgvehdvepvagclvvflsgevphevlpagrerlsltgwfrrrgndpf

    Sequence, based on observed residues (ATOM records): (download) 
    >4iw3J (J:)
hpmlaavvddlathgwsqqahflpadlvralaaecrrrdaegelnpagvgrgatqevret
irgdqiqwidpgqaeacdqylaamdqlrlainqglflgledfechfalyppgafyrrhld
rfrdddrrmvsavlylnegwqphdggqlrmfladgvehdvepvagclvvflsgevphevl
pagrerlsltgwfrrrgndpf

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >4iw3K (K:)
mgsshhhhhhssglvprgshmasmtggqqmgrgsefmakekfdrslphvnvgtighvdhg
kttltaaltrvcsevfgsaivefdkidsapeekargitintahveynstirhyahvdcpg
hadyvknmitgaaqmdgailvcsaadgpmpqtrehillsrqvgvpyivvflnkadlvdda
ellelvemevrdllstydfpgddtpiiigsarmalegkddnemgttavkklvetldsyip
epvraidqpflmpiedvfsisgrgtvvtgriergivrvqdpleivglrdtttttctgvem
frklldegragencgvllrgtkrddvergqvlvkpgsvkphtkftaevyvlskeeggrht
pffkgyrpqfyfrttdvtgncelpegvemvmpgdniqmtvtliktiamedglrfairegg
rtvgagvvakiie

    Sequence, based on observed residues (ATOM records): (download) 
    >4iw3K (K:)
lphvnvgtighvdhgkttltaaltrvcsevfgkidsapeekagitintahveynstirhy
ahvdcpghadyvknmitgaaqmdgailvcsaadgpmpqtrehillsrqvgvpyivvflnk
adlvaellelvemevrdllstydfpgddtpiiigsarmalegkddnemgttavkklvetl
dsyipepvraidqpflmpiedvfsisgrgtvvtgriergivrvqdpleivglrdtttttc
tgvemfrklldegragencgvllrgtkrddvergqvlvkpgsvkphtkftaevyvlskee
ggrhtpffkgyrpqfyfrttdvtgncelpegvemvmpgdniqmtvtliktiamedglrfa
ireggrtvgagvvakiie