PDB entry 4ilj
View 4ilj on RCSB PDB site
Description: Crystal structure of an Prp8p RNaseH W1911A mutant protein
Class: splicing
Keywords: U5 snRNP assembly, Aar2, Prp8, SPLICING
Deposited on
2012-12-31, released
2013-03-13
The last revision prior to the SCOPe 2.07 freeze date was dated
2013-03-27, with a file datestamp of
2013-03-22.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.182
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Pre-mRNA-splicing factor 8
Species: Saccharomyces cerevisiae [TaxId:559292]
Gene: PRP8, DBF3, DNA39, RNA8, SLT21, USA2, YHR165C
Database cross-references and differences (RAF-indexed):
- Uniprot P33334 (3-End)
- expression tag (0-2)
- engineered mutation (78)
Domains in SCOPe 2.07: d4ilja1, d4ilja2 - Chain 'B':
Compound: Pre-mRNA-splicing factor 8
Species: Saccharomyces cerevisiae [TaxId:559292]
Gene: PRP8, DBF3, DNA39, RNA8, SLT21, USA2, YHR165C
Database cross-references and differences (RAF-indexed):
- Uniprot P33334 (3-End)
- expression tag (0-2)
- engineered mutation (78)
Domains in SCOPe 2.07: d4iljb1, d4iljb2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4iljA (A:)
gamnssnyaelfnndiklfvddtnvyrvtvhktfegnvatkaingciftlnpktghlflk
iihtsvwagqkrlsqlakaktaeevsalvrslpkeeqpkqiivtrkamldplevhmldfp
niairptelrlpfsaamsidklsdvvmkatepqmvlfniyddwldrissytafsrltlll
ralktneesakmillsdptitiksyhlwpsftdeqwitiesqmrdlilteygrkynvnis
altqteikdiilgqnika
Sequence, based on observed residues (ATOM records): (download)
>4iljA (A:)
gamnssnyaelfnndiklfvddtnvyrvtvhktfegnvatkaingciftlnpktghlflk
iihtsvwagqkrlsqlakaktaeevsalvrslpkeeqpkqiivtrkamldplevhmldfp
niairptelrlpfsaamsidklsdvvmkatepqmvlfniyddwldrissytafsrltlll
ralktneesakmillsdptitiksyhlwpsftdeqwitiesqmrdlilteygrkynvnis
altqteikdiilgq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4iljB (B:)
gamnssnyaelfnndiklfvddtnvyrvtvhktfegnvatkaingciftlnpktghlflk
iihtsvwagqkrlsqlakaktaeevsalvrslpkeeqpkqiivtrkamldplevhmldfp
niairptelrlpfsaamsidklsdvvmkatepqmvlfniyddwldrissytafsrltlll
ralktneesakmillsdptitiksyhlwpsftdeqwitiesqmrdlilteygrkynvnis
altqteikdiilgqnika
Sequence, based on observed residues (ATOM records): (download)
>4iljB (B:)
gamnssnyaelfnndiklfvddtnvyrvtvhktfegnvatkaingciftlnpktghlflk
iihtsvwagqkrlsqlakaktaeevsalvrslpkeeqpkqiivtrkamldplevhmldfp
niairptelrlpfsaamsidklsdvvmkatepqmvlfniyddwldrissytafsrltlll
ralktneesakmillsdptitiksyhlwpsftdeqwitiesqmrdlilteygrkynvnis
altqteikdiilgq