PDB entry 4ik0
View 4ik0 on RCSB PDB site
Description: Crystal structure of diaminopimelate epimerase Y268A mutant from Escherichia coli
Class: isomerase
Keywords: DAP epimerase-like, Isomerase, Cytosol
Deposited on
2012-12-24, released
2013-02-20
The last revision prior to the SCOPe 2.08 freeze date was dated
2013-04-17, with a file datestamp of
2013-04-12.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.178
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Diaminopimelate epimerase
Species: Escherichia coli [TaxId:83333]
Gene: DAPF
Database cross-references and differences (RAF-indexed):
- Uniprot P0A6K1 (0-273)
- engineered mutation (267)
Domains in SCOPe 2.08: d4ik0a1, d4ik0a2 - Chain 'B':
Compound: Diaminopimelate epimerase
Species: Escherichia coli [TaxId:83333]
Gene: DAPF
Database cross-references and differences (RAF-indexed):
- Uniprot P0A6K1 (0-273)
- engineered mutation (267)
- expression tag (274)
Domains in SCOPe 2.08: d4ik0b1, d4ik0b2, d4ik0b3 - Heterogens: IOD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4ik0A (A:)
mqfskmhglgndfmvvdavtqnvffspelirrladrhlgvgfdqllvveppydpeldfhy
rifnadgsevaqcgngarcfarfvrlkgltnkrdirvstangrmvltvtdddlvrvnmge
pnfepsavpfrankaektyimraaeqtilcgvvsmgnphcviqvddvdtaavetlgpvle
sherfperanigfmqvvkrehirlrvyergagetqacgsgacaavavgiqqgllaeevrv
elpggrldiawkgpghplymtgpavhvadgfihlhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4ik0A (A:)
mqfskmhglgndfmvvdavtqnvffspelirrladrhlgvgfdqllvveppydpeldfhy
rifnadgsevaqcgngarcfarfvrlkgltnkrdirvstangrmvltvtdddlvrvnmge
pnfepsavpfrankaektyimraaeqtilcgvvsmgnphcviqvddvdtaavetlgpvle
sherfperanigfmqvvkrehirlrvyergagetqacgsgacaavavgiqqgllaeevrv
elpggrldiawkgpghplymtgpavhvadgfihl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4ik0B (B:)
mqfskmhglgndfmvvdavtqnvffspelirrladrhlgvgfdqllvveppydpeldfhy
rifnadgsevaqcgngarcfarfvrlkgltnkrdirvstangrmvltvtdddlvrvnmge
pnfepsavpfrankaektyimraaeqtilcgvvsmgnphcviqvddvdtaavetlgpvle
sherfperanigfmqvvkrehirlrvyergagetqacgsgacaavavgiqqgllaeevrv
elpggrldiawkgpghplymtgpavhvadgfihlhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4ik0B (B:)
mqfskmhglgndfmvvdavtqnvffspelirrladrhlgvgfdqllvveppydpeldfhy
rifnadgsevaqcgngarcfarfvrlkgltnkrdirvstangrmvltvtdddlvrvnmge
pnfepsavpfrankaektyimraaeqtilcgvvsmgnphcviqvddvdtaavetlgpvle
sherfperanigfmqvvkrehirlrvyergagetqacgsgacaavavgiqqgllaeevrv
elpggrldiawkgpghplymtgpavhvadgfihlh