PDB entry 4ihy

View 4ihy on RCSB PDB site
Description: Crystal structure of Fis bound to 27bp Inosine substituted DNA F29-dI (AAATTTGTTTGIICICTGAGCAAATTT)
Class: transcription/DNA
Keywords: Protein-DNA complex, HTH domain, minor groove compression, DNA bending, indirect recognition, TRANSCRIPTION-DNA complex
Deposited on 2012-12-19, released 2013-05-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-07-31, with a file datestamp of 2013-07-26.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.232
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA-binding protein fis
    Species: Escherichia coli [TaxId:83333]
    Gene: ECDH1ME8569_3147, EcDH1_0445, fis
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4ihya_
  • Chain 'B':
    Compound: DNA-binding protein fis
    Species: Escherichia coli [TaxId:83333]
    Gene: ECDH1ME8569_3147, EcDH1_0445, fis
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4ihyb_
  • Chain 'C':
    Compound: 27-bp DNA Strand A
    Species:
    Gene:
  • Chain 'D':
    Compound: 27-bp DNA Strand B
    Species:
    Gene:
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4ihyA (A:)
    mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveq
    plldmvmqytrgnqtraalmmginrgtlrkklkkygmn
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ihyA (A:)
    sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvm
    qytrgnqtraalmmginrgtlrkklkkygmn
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4ihyB (B:)
    mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveq
    plldmvmqytrgnqtraalmmginrgtlrkklkkygmn
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.