PDB entry 4icn

View 4icn on RCSB PDB site
Description: Dihydrodipicolinate synthase from shewanella benthica
Class: lyase
Keywords: dihydrodipicolinate synthase, lysine biosynthesis, tim barrel, lyase
Deposited on 2012-12-10, released 2013-12-11
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-12-11, with a file datestamp of 2013-12-06.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.202
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dihydrodipicolinate synthase
    Species: SHEWANELLA BENTHICA [TaxId:43661]
    Gene: dapA
    Database cross-references and differences (RAF-indexed):
    • PDB 4ICN (0-299)
    Domains in SCOPe 2.03: d4icna_
  • Chain 'B':
    Compound: Dihydrodipicolinate synthase
    Species: SHEWANELLA BENTHICA [TaxId:43661]
    Gene: dapA
    Database cross-references and differences (RAF-indexed):
    • PDB 4ICN (Start-299)
    Domains in SCOPe 2.03: d4icnb_
  • Heterogens: TRS, GOL, SO4, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4icnA (A:)
eswgshmingsivalitplnsdgtvdytsleklveyhitegtdaivavgttgesatlpis
ehiavvgqtvkfasgripviggnganataeaieltkaqnklgvaamlgvtpyynkpspkg
liahytavaastdipqilynvpgrtavdmlpetiaqlvevpniigvkdatgdvarvkqlr
dlcgndfllysgddatarefltlggdgvisvannivpklfklmcdaalagdtqaamaaed
qikglfsalfceanpipvkwaahkmglisqgdirlpltelstefhgllldamknarievk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4icnB (B:)
eswgshmingsivalitplnsdgtvdytsleklveyhitegtdaivavgttgesatlpis
ehiavvgqtvkfasgripviggnganataeaieltkaqnklgvaamlgvtpyynkpspkg
liahytavaastdipqilynvpgrtavdmlpetiaqlvevpniigvkdatgdvarvkqlr
dlcgndfllysgddatarefltlggdgvisvannivpklfklmcdaalagdtqaamaaed
qikglfsalfceanpipvkwaahkmglisqgdirlpltelstefhgllldamknarievk

    Sequence, based on observed residues (ATOM records): (download) 
    >4icnB (B:)
hmingsivalitplnsdgtvdytsleklveyhitegtdaivavgttgesatlpisehiav
vgqtvkfasgripviggnganataeaieltkaqnklgvaamlgvtpyynkpspkgliahy
tavaastdipqilynvpgrtavdmlpetiaqlvevpniigvkdatgdvarvkqlrdlcgn
dfllysgddatarefltlggdgvisvannivpklfklmcdaalagdtqaamaaedqikgl
fsalfceanpipvkwaahkmglisqgdirlpltelstefhgllldamknarievk