PDB entry 4i5d

View 4i5d on RCSB PDB site
Description: Crystal structure of Ralstonia sp. alcohol dehydrogenase in its apo form
Class: oxidoreductase
Keywords: short-chain-dehydrogenases/reductases, Rossmann fold, Ralstonia sp., alcohol dehydrogenase, RasADH, cosubstrate specificity, NADH, S-phenylethanol, Oxidoreductase
Deposited on 2012-11-28, released 2013-06-12
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-06-12, with a file datestamp of 2013-06-07.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.197
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Alclohol dehydrogenase/short-chain dehydrogenase
    Species: Ralstonia sp. [TaxId:517192]
    Gene: RasADH
    Database cross-references and differences (RAF-indexed):
    • Uniprot C0IR58 (14-261)
      • expression tag (13)
    Domains in SCOPe 2.03: d4i5da_
  • Chain 'B':
    Compound: Alclohol dehydrogenase/short-chain dehydrogenase
    Species: Ralstonia sp. [TaxId:517192]
    Gene: RasADH
    Database cross-references and differences (RAF-indexed):
    • Uniprot C0IR58 (14-261)
      • expression tag (13)
    Domains in SCOPe 2.03: d4i5db_
  • Chain 'C':
    Compound: Alclohol dehydrogenase/short-chain dehydrogenase
    Species: Ralstonia sp. [TaxId:517192]
    Gene: RasADH
    Database cross-references and differences (RAF-indexed):
    • Uniprot C0IR58 (14-261)
      • expression tag (13)
    Domains in SCOPe 2.03: d4i5dc_
  • Chain 'D':
    Compound: Alclohol dehydrogenase/short-chain dehydrogenase
    Species: Ralstonia sp. [TaxId:517192]
    Gene: RasADH
    Database cross-references and differences (RAF-indexed):
    • Uniprot C0IR58 (14-261)
      • expression tag (13)
    Domains in SCOPe 2.03: d4i5dd_
  • Chain 'E':
    Compound: Alclohol dehydrogenase/short-chain dehydrogenase
    Species: Ralstonia sp. [TaxId:517192]
    Gene: RasADH
    Database cross-references and differences (RAF-indexed):
    • Uniprot C0IR58 (14-261)
      • expression tag (13)
    Domains in SCOPe 2.03: d4i5de_
  • Chain 'F':
    Compound: Alclohol dehydrogenase/short-chain dehydrogenase
    Species: Ralstonia sp. [TaxId:517192]
    Gene: RasADH
    Database cross-references and differences (RAF-indexed):
    • Uniprot C0IR58 (14-261)
      • expression tag (13)
    Domains in SCOPe 2.03: d4i5df_
  • Chain 'G':
    Compound: Alclohol dehydrogenase/short-chain dehydrogenase
    Species: Ralstonia sp. [TaxId:517192]
    Gene: RasADH
    Database cross-references and differences (RAF-indexed):
    • Uniprot C0IR58 (14-261)
      • expression tag (13)
    Domains in SCOPe 2.03: d4i5dg_
  • Chain 'H':
    Compound: Alclohol dehydrogenase/short-chain dehydrogenase
    Species: Ralstonia sp. [TaxId:517192]
    Gene: RasADH
    Database cross-references and differences (RAF-indexed):
    • Uniprot C0IR58 (14-261)
      • expression tag (13)
    Domains in SCOPe 2.03: d4i5dh_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4i5dA (A:)
masrgshhhhhhgayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaa
aeigrnvtavkadvtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrt
fdvnvrgliftvqkalpllrdggsviltssvagvlglqahdtysaakaavrslartwtte
lkgrsirvnavspgaidtpiienqvstqeeadelrakfaaatplgrvgrpeelaaavlfl
asddssyvagielfvdggltqv

    Sequence, based on observed residues (ATOM records): (download) 
    >4i5dA (A:)
ayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaaaeigrnvtavkad
vtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrtfdvnvrgliftvq
kalpllrdggsviltssvagvlglqahdtysaakaavrslartwttelkgrsirvnavsp
gaidtpakfaaatplgrvgrpeelaaavlflasddssyvagielfvdggltqv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4i5dB (B:)
masrgshhhhhhgayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaa
aeigrnvtavkadvtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrt
fdvnvrgliftvqkalpllrdggsviltssvagvlglqahdtysaakaavrslartwtte
lkgrsirvnavspgaidtpiienqvstqeeadelrakfaaatplgrvgrpeelaaavlfl
asddssyvagielfvdggltqv

    Sequence, based on observed residues (ATOM records): (download) 
    >4i5dB (B:)
ayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaaaeigrnvtavkad
vtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrtfdvnvrgliftvq
kalpllrdggsviltssvagvlglqahdtysaakaavrslartwttelkgrsirvnavsp
gaidtpakfaaatplgrvgrpeelaaavlflasddssyvagielfvdggltqv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4i5dC (C:)
masrgshhhhhhgayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaa
aeigrnvtavkadvtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrt
fdvnvrgliftvqkalpllrdggsviltssvagvlglqahdtysaakaavrslartwtte
lkgrsirvnavspgaidtpiienqvstqeeadelrakfaaatplgrvgrpeelaaavlfl
asddssyvagielfvdggltqv

    Sequence, based on observed residues (ATOM records): (download) 
    >4i5dC (C:)
ayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaaaeigrnvtavkad
vtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrtfdvnvrgliftvq
kalpllrdggsviltssvagvlglqahdtysaakaavrslartwttelkgrsirvnavsp
gaidtpakfaaatplgrvgrpeelaaavlflasddssyvagielfvdggltqv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4i5dD (D:)
masrgshhhhhhgayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaa
aeigrnvtavkadvtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrt
fdvnvrgliftvqkalpllrdggsviltssvagvlglqahdtysaakaavrslartwtte
lkgrsirvnavspgaidtpiienqvstqeeadelrakfaaatplgrvgrpeelaaavlfl
asddssyvagielfvdggltqv

    Sequence, based on observed residues (ATOM records): (download) 
    >4i5dD (D:)
ayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaaaeigrnvtavkad
vtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrtfdvnvrgliftvq
kalpllrdggsviltssvagvlglqahdtysaakaavrslartwttelkgrsirvnavsp
gaidtpakfaaatplgrvgrpeelaaavlflasddssyvagielfvdggltqv

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4i5dE (E:)
masrgshhhhhhgayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaa
aeigrnvtavkadvtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrt
fdvnvrgliftvqkalpllrdggsviltssvagvlglqahdtysaakaavrslartwtte
lkgrsirvnavspgaidtpiienqvstqeeadelrakfaaatplgrvgrpeelaaavlfl
asddssyvagielfvdggltqv

    Sequence, based on observed residues (ATOM records): (download) 
    >4i5dE (E:)
ayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaaaeigrnvtavkad
vtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrtfdvnvrgliftvq
kalpllrdggsviltssvagvlglqahdtysaakaavrslartwttelkgrsirvnavsp
gaidtpakfaaatplgrvgrpeelaaavlflasddssyvagielfvdggltqv

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4i5dF (F:)
masrgshhhhhhgayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaa
aeigrnvtavkadvtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrt
fdvnvrgliftvqkalpllrdggsviltssvagvlglqahdtysaakaavrslartwtte
lkgrsirvnavspgaidtpiienqvstqeeadelrakfaaatplgrvgrpeelaaavlfl
asddssyvagielfvdggltqv

    Sequence, based on observed residues (ATOM records): (download) 
    >4i5dF (F:)
ayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaaaeigrnvtavkad
vtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrtfdvnvrgliftvq
kalpllrdggsviltssvagvlglqahdtysaakaavrslartwttelkgrsirvnavsp
gaidtpakfaaatplgrvgrpeelaaavlflasddssyvagielfvdggltqv

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4i5dG (G:)
masrgshhhhhhgayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaa
aeigrnvtavkadvtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrt
fdvnvrgliftvqkalpllrdggsviltssvagvlglqahdtysaakaavrslartwtte
lkgrsirvnavspgaidtpiienqvstqeeadelrakfaaatplgrvgrpeelaaavlfl
asddssyvagielfvdggltqv

    Sequence, based on observed residues (ATOM records): (download) 
    >4i5dG (G:)
ayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaaaeigrnvtavkad
vtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrtfdvnvrgliftvq
kalpllrdggsviltssvagvlglqahdtysaakaavrslartwttelkgrsirvnavsp
gaidtpakfaaatplgrvgrpeelaaavlflasddssyvagielfvdggltqv

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4i5dH (H:)
masrgshhhhhhgayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaa
aeigrnvtavkadvtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrt
fdvnvrgliftvqkalpllrdggsviltssvagvlglqahdtysaakaavrslartwtte
lkgrsirvnavspgaidtpiienqvstqeeadelrakfaaatplgrvgrpeelaaavlfl
asddssyvagielfvdggltqv

    Sequence, based on observed residues (ATOM records): (download) 
    >4i5dH (H:)
ayrllnktavitggnsgiglatakrfvaegayvfivgrrrkeleqaaaeigrnvtavkad
vtkledldrlyaivreqrgsidvlfansgaieqktleeitpehydrtfdvnvrgliftvq
kalpllrdggsviltssvagvlglqahdtysaakaavrslartwttelkgrsirvnavsp
gaidtpakfaaatplgrvgrpeelaaavlflasddssyvagielfvdggltqv