PDB entry 4hyy

View 4hyy on RCSB PDB site
Description: Filament of octameric rings of DMC1 recombinase from Homo sapiens
Class: Recombination
Keywords: RecA homolog, DNA strand exchange, DNA, nucleus, Recombination
Deposited on 2012-11-14, released 2013-04-10
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-04-10, with a file datestamp of 2013-04-05.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.182
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Meiotic recombination protein DMC1/LIM15 homolog
    Species: Homo sapiens [TaxId:9606]
    Gene: DMC1, DMC1H, LIM15
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4hyya_
  • Chain 'B':
    Compound: Meiotic recombination protein DMC1/LIM15 homolog
    Species: Homo sapiens [TaxId:9606]
    Gene: DMC1, DMC1H, LIM15
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4hyyb_
  • Chain 'C':
    Compound: Meiotic recombination protein DMC1/LIM15 homolog
    Species: Homo sapiens [TaxId:9606]
    Gene: DMC1, DMC1H, LIM15
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4hyyc_
  • Chain 'D':
    Compound: Meiotic recombination protein DMC1/LIM15 homolog
    Species: Homo sapiens [TaxId:9606]
    Gene: DMC1, DMC1H, LIM15
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4hyyd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4hyyA (A:)
gfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvta
qlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmell
dyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeynva
vfvtnqmtadpgatmtfqadpkkpigghilahasttrislrkgrgelriakiydspempe
neatfaitaggigdakelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4hyyA (A:)
gfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvta
qlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmell
dyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeynva
vfvtnqmtkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd
a

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4hyyB (B:)
gfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvta
qlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmell
dyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeynva
vfvtnqmtadpgatmtfqadpkkpigghilahasttrislrkgrgelriakiydspempe
neatfaitaggigdakelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4hyyB (B:)
gfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvta
qlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmell
dyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeynva
vfvtnqmtkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd
a

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4hyyC (C:)
gfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvta
qlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmell
dyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeynva
vfvtnqmtadpgatmtfqadpkkpigghilahasttrislrkgrgelriakiydspempe
neatfaitaggigdakelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4hyyC (C:)
gfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvta
qlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmell
dyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeynva
vfvtnqmtkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd
a

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4hyyD (D:)
gfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvta
qlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmell
dyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeynva
vfvtnqmtadpgatmtfqadpkkpigghilahasttrislrkgrgelriakiydspempe
neatfaitaggigdakelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4hyyD (D:)
gfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvta
qlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmell
dyvaakfheeagifklliidsimalfrvdfsgrgelaerqqklaqmlsrlqkiseeynva
vfvtnqmtkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd
a