PDB entry 4hmz

View 4hmz on RCSB PDB site
Description: Crystal Structure of ChmJ, a 3'-monoepimerase from Streptomyces bikiniensis in complex with dTDP-quinovose
Class: unknown function
Keywords: 3'-monoepimerase, natural product, deoxysugar, chalcomycin, dTDP-mycinose, dTDP-quinovose, Cupin fold, nucleotide-linked sugar, Epimerization, UNKNOWN FUNCTION
Deposited on 2012-10-18, released 2012-11-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-12-05, with a file datestamp of 2012-11-30.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.202
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative 3-epimerase in D-allose pathway
    Species: Streptomyces bikiniensis [TaxId:1896]
    Gene: chmJ
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5SFD1 (0-195)
      • expression tag (196-197)
    Domains in SCOPe 2.08: d4hmza1, d4hmza2
  • Chain 'B':
    Compound: Putative 3-epimerase in D-allose pathway
    Species: Streptomyces bikiniensis [TaxId:1896]
    Gene: chmJ
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5SFD1 (0-195)
      • expression tag (196-198)
    Domains in SCOPe 2.08: d4hmzb1, d4hmzb2
  • Chain 'C':
    Compound: Putative 3-epimerase in D-allose pathway
    Species: Streptomyces bikiniensis [TaxId:1896]
    Gene: chmJ
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5SFD1 (0-195)
      • expression tag (196-199)
    Domains in SCOPe 2.08: d4hmzc1, d4hmzc2
  • Chain 'D':
    Compound: Putative 3-epimerase in D-allose pathway
    Species: Streptomyces bikiniensis [TaxId:1896]
    Gene: chmJ
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5SFD1 (0-195)
      • expression tag (196-199)
    Domains in SCOPe 2.08: d4hmzd1, d4hmzd2
  • Heterogens: EDO, 18T, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4hmzA (A:)
mhplsiegawsqepvihsdhrgrshewfrgesfrqafghdfpvaqvnvavshrgalrgih
yteippgqakysvcvrgagldvvvdvrigsptfgrweivpmdaerntavyltaglgrafl
sltddatlvylcssgyaparehsvnpldpdlgiawpddiepllsdrdenaptlataerlg
llptyqawqeqqqaqrlehh

    Sequence, based on observed residues (ATOM records): (download) 
    >4hmzA (A:)
mhplsiegawsqepvihsdhrgrshewfrgesfrqafghdfpvaqvnvavshrgalrgih
yteippgqakysvcvrgagldvvvdvrigsptfgrweivpmdaerntavyltaglgrafl
sltddatlvylcssgyaparehsvnpldpdlgiawpddiepllsdrdenaptlataerlg
llptyqawqeqqqaqrle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4hmzB (B:)
mhplsiegawsqepvihsdhrgrshewfrgesfrqafghdfpvaqvnvavshrgalrgih
yteippgqakysvcvrgagldvvvdvrigsptfgrweivpmdaerntavyltaglgrafl
sltddatlvylcssgyaparehsvnpldpdlgiawpddiepllsdrdenaptlataerlg
llptyqawqeqqqaqrlehh

    Sequence, based on observed residues (ATOM records): (download) 
    >4hmzB (B:)
mhplsiegawsqepvihsdhrgrshewfrgesfrqafghdfpvaqvnvavshrgalrgih
yteippgqakysvcvrgagldvvvdvrigsptfgrweivpmdaerntavyltaglgrafl
sltddatlvylcssgyaparehsvnpldpdlgiawpddiepllsdrdenaptlataerlg
llptyqawqeqqqaqrleh

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4hmzC (C:)
mhplsiegawsqepvihsdhrgrshewfrgesfrqafghdfpvaqvnvavshrgalrgih
yteippgqakysvcvrgagldvvvdvrigsptfgrweivpmdaerntavyltaglgrafl
sltddatlvylcssgyaparehsvnpldpdlgiawpddiepllsdrdenaptlataerlg
llptyqawqeqqqaqrlehh

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4hmzD (D:)
mhplsiegawsqepvihsdhrgrshewfrgesfrqafghdfpvaqvnvavshrgalrgih
yteippgqakysvcvrgagldvvvdvrigsptfgrweivpmdaerntavyltaglgrafl
sltddatlvylcssgyaparehsvnpldpdlgiawpddiepllsdrdenaptlataerlg
llptyqawqeqqqaqrlehh