PDB entry 4hkz
View 4hkz on RCSB PDB site
Description: Trastuzumab Fab complexed with Protein L and Protein A fragments
Class: immune system
Keywords: monoclonal antibody, immune system, cancer therapeutic
Deposited on
2012-10-15, released
2013-10-09
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-15, with a file datestamp of
2017-11-10.
Experiment type: XRAY
Resolution: 2.08 Å
R-factor: N/A
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Trastuzumab light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4hkza1, d4hkza2 - Chain 'B':
Compound: Trastuzumab heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4hkzb_ - Chain 'E':
Compound: Protein L fragment
Species: Finegoldia magna [TaxId:1260]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4hkze1, d4hkze2 - Chain 'H':
Compound: Immunoglobulin G-binding protein A
Species: Staphylococcus aureus [TaxId:158878]
Gene: spa, SAV0111
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4hkzh1, d4hkzh2 - Heterogens: CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4hkzA (A:)
diqmtqspsslsasvgdrvtitcrasqdvntavawyqqkpgkapklliysasflysgvps
rfsgsrsgtdftltisslqpedfatyycqqhyttpptfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4hkzB (B:)
evqlvesggglvqpggslrlscaasgfnikdtyihwvrqapgkglewvariyptngytry
adsvkgrftisadtskntaylqmnslraedtavyycsrwggdgfyamdywgqgtlvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>4hkzE (E:)
sevtikvnlifadgkiqtaefkgtfeeataeayryaallakvngeytadledggnhmnik
fag
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>4hkzH (H:)
gsynkdqqsafyeilnmpnlneaqrngfiqslkddpsqstnvlgeakklnesqa