PDB entry 4hem

View 4hem on RCSB PDB site
Description: Llama vHH-02 binder of ORF49 (RBP) from lactococcal phage TP901-1
Class: viral protein
Keywords: Alpha-beta, Phage Receptor Binding Protein, Llama vHH, viral protein, CELL ADHESION-IMMUNE SYSTEM complex
Deposited on 2012-10-04, released 2013-03-20
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-07-31, with a file datestamp of 2013-07-26.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.168
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: bpp
    Species: Lactococcus phage TP901-1 [TaxId:35345]
    Gene: bpp, ORF49
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4hema1
  • Chain 'B':
    Compound: bpp
    Species: Lactococcus phage TP901-1 [TaxId:35345]
    Gene: bpp, ORF49
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: bpp
    Species: Lactococcus phage TP901-1 [TaxId:35345]
    Gene: bpp, ORF49
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Anti-baseplate TP901-1 Llama vHH 02
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 4HEM (0-122)
    Domains in SCOPe 2.03: d4heme_
  • Chain 'F':
    Compound: Anti-baseplate TP901-1 Llama vHH 02
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 4HEM (0-End)
    Domains in SCOPe 2.03: d4hemf_
  • Chain 'G':
    Compound: Anti-baseplate TP901-1 Llama vHH 02
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 4HEM (0-122)
    Domains in SCOPe 2.03: d4hemg_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4hemA (A:)
masikkvyrgmkngaetinddleainseltsggnvvhktgdetiagkktftgnvevngsl
tlptkswsgelgggiilslrkkgttveysiggeisssilansnlvnrsvpnefcprnrcs
lvghmvggwnafhidipssgvcqwfgptassgtprgtgtypid

    Sequence, based on observed residues (ATOM records): (download) 
    >4hemA (A:)
nvvhktgdetiagkktftgnvevngsltlptkswsgelgggiilslrkkgttveysigge
isssilansnlvnrsvpnefcprnrcslvghmvggwnafhidipssgvcqwfgptassgt
prgtgtypid

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4hemE (E:)
qvqlvesggglvqaggslrlscaasestfsnyamgwfrqapgperefvatisqtgshtyy
rnsvkgrftisrdnakntvylqmnnmkpedtavyycaagdnyyytrtyeydywgqgtqvt
vss

    Sequence, based on observed residues (ATOM records): (download) 
    >4hemE (E:)
qvqlvesggglvqaggslrlscaasestfsnyamgwfrqaperefvatisqtgshtyyrn
svkgrftisrdnakntvylqmnnmkpedtavyycaagdnyyytrtyeydywgqgtqvtvs
s

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4hemF (F:)
qvqlvesggglvqaggslrlscaasestfsnyamgwfrqapgperefvatisqtgshtyy
rnsvkgrftisrdnakntvylqmnnmkpedtavyycaagdnyyytrtyeydywgqgtqvt
vss

    Sequence, based on observed residues (ATOM records): (download) 
    >4hemF (F:)
qvqlvesggglvqaggslrlscaasestfsnyamgwfrqapgperefvatisqtgshtyy
rnsvkgrftisrdnakntvylqmnnmkpedtavyycaagdnyyytrtyeydywgqgtqvt
vs

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4hemG (G:)
qvqlvesggglvqaggslrlscaasestfsnyamgwfrqapgperefvatisqtgshtyy
rnsvkgrftisrdnakntvylqmnnmkpedtavyycaagdnyyytrtyeydywgqgtqvt
vss

    Sequence, based on observed residues (ATOM records): (download) 
    >4hemG (G:)
qvqlvesggglvqaggslrlscaasestfsnyamgwfrqaperefvatisqtgshtyyrn
svkgrftisrdnakntvylqmnnmkpedtavyycaagdnyyytrtyeydywgqgtqvtvs
s