PDB entry 4hcr
View 4hcr on RCSB PDB site
Description: Crystal structure of human MAdCAM-1 D1D2 complexed with Fab PF-547659
Class: immune system
Keywords: immunoglobulin superfamily, rolling and firm adhesion, integrin alpha4beta7, IMMUNE SYSTEM
Deposited on
2012-10-01, released
2013-01-23
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-01-23, with a file datestamp of
2013-01-18.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.158
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Mucosal addressin cell adhesion molecule 1
Species: Homo sapiens [TaxId:9606]
Gene: MADCAM1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4hcra1, d4hcra2 - Chain 'B':
Compound: Mucosal addressin cell adhesion molecule 1
Species: Homo sapiens [TaxId:9606]
Gene: MADCAM1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4hcrb1, d4hcrb2 - Chain 'H':
Compound: PF-547659 heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: PF-547659 light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4hcrl1, d4hcrl2 - Chain 'M':
Compound: PF-547659 heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'N':
Compound: PF-547659 light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4hcrn1, d4hcrn2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4hcrA (A:)
vkplqveppepvvavalgasrqltcrlacadrgasvqwrgldtslgavqsdtgrsvltvr
naslsaagtrvcvgscggrtfqhtvqllvyafpnqltvspaalvpgdpevactahkvtpv
dpnalsfsllvggqelegaqalgpevqeeeeepqgdedvlfrvterwrlpplgtpvppal
ycqatmrlpglelshrqaipvlhhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4hcrA (A:)
vkplqveppepvvavalgasrqltcrlacadrgasvqwrgldtslgavqsdtgrsvltvr
naslsaagtrvcvgscggrtfqhtvqllvyafpnqltvspaalvpgdpevactahkvtpv
dpnalsfsllvggqelegaqalgpevqeedvlfrvterwrlpplgtpvppalycqatmrl
pglelshrqaipvl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4hcrB (B:)
vkplqveppepvvavalgasrqltcrlacadrgasvqwrgldtslgavqsdtgrsvltvr
naslsaagtrvcvgscggrtfqhtvqllvyafpnqltvspaalvpgdpevactahkvtpv
dpnalsfsllvggqelegaqalgpevqeeeeepqgdedvlfrvterwrlpplgtpvppal
ycqatmrlpglelshrqaipvlhhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4hcrB (B:)
vkplqveppepvvavalgasrqltcrlacadrgasvqwrgldtslgavqsdtgrsvltvr
naslsaagtrvcvgscggrtfqhtvqllvyafpnqltvspaalvpgdpevactahkvtpv
dpnalsfsllvggqelegaqalgpevqeedvlfrvterwrlpplgtpvppalycqatmrl
pglelshrqaipvl
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4hcrL (L:)
divmtqtplslsvtpgqpasisckssqsllhtdgttylywylqkpgqppqlliyevsnrf
sgvpdrfsgsgsgtdftlkisrveaedvgiyycmqniqlpwtfgqgtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>4hcrL (L:)
divmtqtplslsvtpgqpasisckssqsllhtdgttylywylqkpgqppqlliyevsnrf
sgvpdrfsgsgsgtdftlkisrveaedvgiyycmqniqlpwtfgqgtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrge
- Chain 'M':
No sequence available.
- Chain 'N':
Sequence, based on SEQRES records: (download)
>4hcrN (N:)
divmtqtplslsvtpgqpasisckssqsllhtdgttylywylqkpgqppqlliyevsnrf
sgvpdrfsgsgsgtdftlkisrveaedvgiyycmqniqlpwtfgqgtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>4hcrN (N:)
divmtqtplslsvtpgqpasisckssqsllhtdgttylywylqkpgqppqlliyevsnrf
sgvpdrfsgsgsgtdftlkisrveaedvgiyycmqniqlpwtfgqgtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrge