PDB entry 4han
View 4han on RCSB PDB site
Description: Crystal structure of Galectin 8 with NDP52 peptide
Class: sugar binding protein
Keywords: Autophagy, innate immunity, carbohydrate recognition domain (CRD), autophagy adapter molecule, NAD binding, NDP52 peoptide binding, Cytosol, SUGAR BINDING PROTEIN
Deposited on
2012-09-27, released
2013-03-20
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-05-15, with a file datestamp of
2013-05-10.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: 0.193
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Galectin-8
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot O00214 (2-156)
- expression tag (0-1)
- conflict (57)
- Uniprot O00214 (159-292)
Domains in SCOPe 2.04: d4hana1, d4hana2 - Chain 'B':
Compound: Galectin-8
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot O00214 (2-156)
- expression tag (0-1)
- conflict (57)
- Uniprot O00214 (159-292)
Domains in SCOPe 2.04: d4hanb1, d4hanb2 - Chain 'C':
Compound: Calcium-binding and coiled-coil domain-containing protein 2
Species: Homo sapiens [TaxId:9606]
Gene: CALCOCO2, NDP52
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Calcium-binding and coiled-coil domain-containing protein 2
Species: Homo sapiens [TaxId:9606]
Gene: CALCOCO2, NDP52
Database cross-references and differences (RAF-indexed):
- Heterogens: NAD, PEG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4hanA (A:)
gsmmlslnnlqniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkp
radvafhfnprfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvav
ngkhtllyghrigpekidtlgiygkvnihsigfsfsshmrlpfaarlntpmgpgrtvvvk
gevnanaksfnvdllagkskdialhlnprlnikafvrnsflqeswgeeernitsfpfspg
myfemiiycdvrefkvavngvhsleykhrfkelssidtleingdihllevrsw
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4hanB (B:)
gsmmlslnnlqniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkp
radvafhfnprfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvav
ngkhtllyghrigpekidtlgiygkvnihsigfsfsshmrlpfaarlntpmgpgrtvvvk
gevnanaksfnvdllagkskdialhlnprlnikafvrnsflqeswgeeernitsfpfspg
myfemiiycdvrefkvavngvhsleykhrfkelssidtleingdihllevrsw
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.