PDB entry 4h13

View 4h13 on RCSB PDB site
Description: Crystal Structure of the Cytochrome b6f Complex from Mastigocladus laminosus with TDS
Class: photosynthesis
Keywords: Alpha helix, beta sheet, Plastoquinol-plastocyanin oxidoreductase, Plastocyanin, Thylakoid membrane, PHOTOSYNTHESIS
Deposited on 2012-09-10, released 2013-02-13
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-04-03, with a file datestamp of 2013-03-29.
Experiment type: XRAY
Resolution: 3.07 Å
R-factor: 0.215
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Cytochrome b6
  Species: Mastigocladus laminosus [TaxId:83541]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P83791 (0-214)
  Domains in SCOPe 2.05: d4h13a_
• Chain 'B':
  Compound: Cytochrome b6-f complex subunit 4
  Species: Mastigocladus laminosus [TaxId:83541]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P83792 (0-159)
  Domains in SCOPe 2.05: d4h13b_
• Chain 'C':
  Compound: Apocytochrome f
  Species: Mastigocladus laminosus [TaxId:83541]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P83793 (0-End)
    • see remark 999 (10)
• Chain 'D':
  Compound: Cytochrome b6-f complex iron-sulfur subunit
  Species: Mastigocladus laminosus [TaxId:83541]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P83794 (Start-178)
  Domains in SCOPe 2.05: d4h13d1, d4h13d2
• Chain 'E':
  Compound: Cytochrome b6-f complex subunit 6
  Species: Mastigocladus laminosus [TaxId:83541]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P83795 (0-31)
• Chain 'F':
  Compound: Cytochrome b6-f complex subunit 7
  Species: Mastigocladus laminosus [TaxId:83541]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P83796
  Domains in SCOPe 2.05: d4h13f_
• Chain 'G':
  Compound: Cytochrome b6-f complex subunit 5
  Species: Mastigocladus laminosus [TaxId:83541]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P83797 (0-36)
  Domains in SCOPe 2.05: d4h13g_
• Chain 'H':
  Compound: Cytochrome b6-f complex subunit 8
  Species: Mastigocladus laminosus [TaxId:83541]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P83798 (0-28)
  Domains in SCOPe 2.05: d4h13h_
• Heterogens: CD, HEM, OPC, MYS, 8K6, UMQ, TDS, CLA, 7PH, SQD, FES, BCR, OCT, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >4h13A (A:)
  manvydwfqerleiqaladdvtskyvpphvnifyclggitltcfliqfatgfamtfyykp
  tvteayasvqyimnevsfgwlirsihrwsasmmvlmmilhvfrvyltggfkkpreltwis
  gvilavitvsfgvtgyslpwdqvgywavkivsgvpeaipvvgvlisdllrggssvgqatl
  tryysahtfvlpwliavfmllhflmirkqgisgpl
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >4h13B (B:)
  matlkkpdlsdpklraklakgmghnyygepawpndllyvfpvvimgtfacivalsvldpa
  mvgepadpfatpleilpewylypvfqilrsvpnkllgvllmasvplglilvpfienvnkf
  qnpfrrpvattiflfgtlvtiwlgigatfpldktltlglf
  

  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  Sequence, based on SEQRES records: (download)
  

  >4h13D (D:)
  maqftesmdvpdmgrrqfmnllafgtvtgvalgalyplvkyfippsggavgggttakdkl
  gnnvkvskfleshnagdrvlvqglkgdptyivveskeairdyginavcthlgcvvpwnaa
  enkfkcpchgsqydetgkvirgpaplslalchatvqddnivltpwtetdfrtgekpwwv
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >4h13D (D:)
  dvpdmgrrqfmnllafgtvtgvalgalyplvkyfippsggavttakdklgnnvkvskfle
  shnagdrvlvqglkgdptyivveskeairdyginavcthlgcvvpwnaaenkfkcpchgs
  qydetgkvirgpaplslalchatvqddnivltpwtetdfrtgekpwwv
  

  
  
• Chain 'E':
  No sequence available.
  
  
• Chain 'F':
  Sequence, based on SEQRES records: (download)
  

  >4h13F (F:)
  mteemlyaallsfglifvgwglgvlllkiqgaeke
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >4h13F (F:)
  teemlyaallsfglifvgwglgvlllkiqga
  

  
  
• Chain 'G':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >4h13G (G:)
  mveplldglvlglvfatlgglfyaayqqykrpnelgg
  

  
  
• Chain 'H':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >4h13H (H:)
  meidvlgwvallvvftwsiamvvwgrngl