PDB entry 4gxq

View 4gxq on RCSB PDB site
Description: Crystal Structure of ATP bound RpMatB-BxBclM chimera B1
Class: ligase
Keywords: RpMatB-BxBclM chimera, ANL Superfamily, methylmalonate-CoA ligase, malonate-CoA ligase, methylmalonate, malonate, LIGASE
Deposited on 2012-09-04, released 2012-10-24
The last revision prior to the SCOPe 2.03 freeze date was dated 2012-12-19, with a file datestamp of 2012-12-14.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.221
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Malonyl CoA synthetase, Benzoate-CoA ligase Chimeric protein
    Species: Rhodopseudomonas palustris, Burkholderia xenovorans [TaxId:258594, 266265]
    Gene: matB, RPA0221
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6ND88 (0-442)
    • Uniprot Q13WK3 (443-467)
    • Uniprot Q6ND88 (468-505)
      • engineered mutation (490)
    Domains in SCOPe 2.03: d4gxqa_
  • Chain 'B':
    Compound: Malonyl CoA synthetase, Benzoate-CoA ligase Chimeric protein
    Species: Rhodopseudomonas palustris, Burkholderia xenovorans [TaxId:258594, 266265]
    Gene: matB, RPA0221
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6ND88 (0-442)
    • Uniprot Q13WK3 (443-467)
    • Uniprot Q6ND88 (468-505)
      • engineered mutation (490)
    Domains in SCOPe 2.03: d4gxqb_
  • Chain 'C':
    Compound: Malonyl CoA synthetase, Benzoate-CoA ligase Chimeric protein
    Species: Rhodopseudomonas palustris, Burkholderia xenovorans [TaxId:258594, 266265]
    Gene: matB, RPA0221
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6ND88 (0-442)
    • Uniprot Q13WK3 (443-467)
    • Uniprot Q6ND88 (468-505)
      • engineered mutation (490)
    Domains in SCOPe 2.03: d4gxqc_
  • Heterogens: ATP, MG, CO3, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4gxqA (A:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytsgttgrskgamlshdnl
asnsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlm
aratvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavlery
gmtetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkg
ywrmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseida
mpgvvesavigvphadfgegvtafvvlkrefapseilaeelkafvkdrlakfkmpkkvif
vddlprntmgavqknvlretykdiyk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4gxqB (B:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytsgttgrskgamlshdnl
asnsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlm
aratvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavlery
gmtetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkg
ywrmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseida
mpgvvesavigvphadfgegvtafvvlkrefapseilaeelkafvkdrlakfkmpkkvif
vddlprntmgavqknvlretykdiyk

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4gxqC (C:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytsgttgrskgamlshdnl
asnsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlm
aratvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavlery
gmtetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkg
ywrmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseida
mpgvvesavigvphadfgegvtafvvlkrefapseilaeelkafvkdrlakfkmpkkvif
vddlprntmgavqknvlretykdiyk