PDB entry 4gvg

View 4gvg on RCSB PDB site
Description: Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ)
Class: hydrolase
Keywords: tim-barrel, hydrolase
Deposited on 2012-08-30, released 2012-12-19
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-12-19, with a file datestamp of 2012-12-14.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.169
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-hexosaminidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: nagZ, STM1209
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4gvga_
  • Chain 'B':
    Compound: Beta-hexosaminidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: nagZ, STM1209
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4gvgb_
  • Heterogens: MES, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4gvgA (A:)
    mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
    vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
    ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavtadshketp
    cdprpetdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelg
    fdgvifsddlsmegaaimgsyaeraqasldagcdmilvcnnrkgavsvldnlspikaerv
    trlyhkgsfsrrelmdsarwktasaqlnqlherwqeekaghgshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4gvgA (A:)
    mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
    vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
    ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavthketpcdp
    rpetdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelgfdg
    vifsddlsmgsyaeraqasldagcdmilvcnnrkgavsvldnlspikaervtrlyhkgsf
    srrelmdsarwktasaqlnqlherwqeekag
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4gvgB (B:)
    mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
    vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
    ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavtadshketp
    cdprpetdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelg
    fdgvifsddlsmegaaimgsyaeraqasldagcdmilvcnnrkgavsvldnlspikaerv
    trlyhkgsfsrrelmdsarwktasaqlnqlherwqeekaghgshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4gvgB (B:)
    mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
    vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
    ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavtetpcdprp
    etdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelgfdgvi
    fsddlsmgsyaeraqasldagcdmilvcnnrkgavsvldnlspikaervtrlyhkgsfsr
    relmdsarwktasaqlnqlherwqeekagh