PDB entry 4gsx

View 4gsx on RCSB PDB site
Description: High resolution structure of dengue virus serotype 1 sE containing stem
Class: viral protein
Keywords: Viral Fusion Protein, VIRAL PROTEIN
Deposited on 2012-08-28, released 2012-12-19
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Envelope protein E
    Species: Dengue virus 1 [TaxId:11059]
    Gene: Envelope protein
    Database cross-references and differences (RAF-indexed):
    • Uniprot P17763
      • engineered mutation (116)
      • conflict (176)
    Domains in SCOPe 2.07: d4gsxa1, d4gsxa2
  • Chain 'B':
    Compound: Envelope protein E
    Species: Dengue virus 1 [TaxId:11059]
    Gene: Envelope protein
    Database cross-references and differences (RAF-indexed):
    • Uniprot P17763
      • conflict (176)
    Domains in SCOPe 2.07: d4gsxb1, d4gsxb2
  • Heterogens: NAG, CD, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gsxA (A:)
ghhhhhhhhgsstsngmrcvgignrdfveglsgatwvdvvlehgscvttmakdkptldie
llktevtnpavlrklcieakisntttdsrcptqgeatlveeqdtnfvcrrtfvdrghgng
cglfgkgslitcakfkcvtklegkivqyenlkysvivtvhtgdqhqvgnettehgtiati
tpqaptseiqltdygaltldcsprtgldfnemvlltmekkswlvhkqwfldlplpwtsga
stsqetwnrqdllvtfktahakkqevvvlgsqegamhtaltgateiqtsgtttifaghlk
crlkmdkltlkgmsyvmctgsfklekevaetqhgtvlvqvkyegtdapckipfssqdekg
vtqngrlitanpivtdkekpvnieaeppfgesyivvgagekalklswfkkgssigkmfea
targarr

    Sequence, based on observed residues (ATOM records): (download) 
    >4gsxA (A:)
rcvgignrdfveglsgatwvdvvlehgscvttmakdkptldiellktevtnpavlrklci
eakisntttdsrcptqgeatlveeqdtnfvcrrtfvdrghgngcglfgkgslitcakfkc
vtklegkivqyenlkysvivtvhtggtiatitpqaptseiqltdygaltldcsprtgldf
nemvlltmekkswlvhkqwfldlplpwtsgastsqetwnrqdllvtfktahakkqevvvl
gsqegamhtaltgateiqtsgtttifaghlkcrlkmdkltlkgmsyvmctgsfklekeva
etqhgtvlvqvkyegtdapckipfssqdekgvtqngrlitanpivtdkekpvnieaeppf
gesyivvgagekalklswfkkgssigkmfe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4gsxB (B:)
ghhhhhhhhgsstsngmrcvgignrdfveglsgatwvdvvlehgscvttmakdkptldie
llktevtnpavlrklcieakisntttdsrcptqgeatlveeqdtnfvcrrtfvdrghgng
cglfgkgslitcakfkcvtklegkivqyenlkysvivtvhtgdqhqvgnettehgtiati
tpqaptseiqltdygaltldcsprtgldfnemvlltmekkswlvhkqwfldlplpwtsga
stsqetwnrqdllvtfktahakkqevvvlgsqegamhtaltgateiqtsgtttifaghlk
crlkmdkltlkgmsyvmctgsfklekevaetqhgtvlvqvkyegtdapckipfssqdekg
vtqngrlitanpivtdkekpvnieaeppfgesyivvgagekalklswfkkgssigkmfea
targarr

    Sequence, based on observed residues (ATOM records): (download) 
    >4gsxB (B:)
rcvgignrdfveglsgatwvdvvlehgscvttmakdkptldiellktevtnpavlrklci
eakisntttdsrcptqgeatlveeqdtnfvcrrtfvdrggngcglfgkgslitcakfkcv
tklegkivqyenlkysvivtvhthgtiatitpqaptseiqltdygaltldcsprtgldfn
emvlltmekkswlvhkqwfldlplpwtsgastsqetwnrqdllvtfktahakkqevvvlg
sqegamhtaltgateiqtsgtttifaghlkcrlkmdkltlkgmsyvmctgsfklekevae
tqhgtvlvqvkyegtdapckipfssqdekgvtqngrlitanpivtdkekpvnieaeppfg
esyivvgagekalklswfkkgssigkmfea