PDB entry 4gsd
View 4gsd on RCSB PDB site
Description: H5.3 Fab Structure
Class: immune system
Keywords: antibody, immune response, influenza H5 Hemagglutanin, IMMUNE SYSTEM
Deposited on
2012-08-27, released
2013-08-21
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-01-24, with a file datestamp of
2018-01-19.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: H5.3 Fab Heavy Chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4gsdh_ - Chain 'L':
Compound: H5.3 Fab Light Chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4gsdl1, d4gsdl2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>4gsdH (H:)
evqlqesgpglvkpsgtvsltcavsggsisssywwswvrqppgkglewigeiyhsgntny
npslksrvtisvdksknlfslklssvtaadtavyycarvalfdiltggwfdpwgqgtlvt
vssagtkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepksc
Sequence, based on observed residues (ATOM records): (download)
>4gsdH (H:)
vqlqesgpglvkpsgtvsltcavsggsisssywwswvrqppgkglewigeiyhsgntnyn
pslksrvtisvdksknlfslklssvtaadtavyycarvalfdiltggwfdpwgqgtlvtv
ssagtkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvep
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4gsdL (L:)
syeltqppsvsvspgqtvnitcsgdtlgdkyvcwyqqkpgqspvlviyqdtkrpsgiper
fsgsnsgdtatltvsgtqamdeadyycqawdsssfvfgtgtkvtvlrqpkanptvtlfpp
sseelqankatlvclisdfypgavtvawkadgspvkagvettkpskqsnnkyaassylsl
tpeqwkshrsyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>4gsdL (L:)
ltqppsvsvspgqtvnitcsgdtlgdkyvcwyqqkpgqspvlviyqdtkrpsgiperfsg
snsgdtatltvsgtqamdeadyycqawdsssfvfgtgtkvtvlrqpkanptvtlfppsse
elqankatlvclisdfypgavtvawkadgspvkagvettkpskqsnnkyaassylsltpe
qwkshrsyscqvthegstvektvapte