PDB entry 4gpd

View 4gpd on RCSB PDB site
Description: the structure of lobster apo-d-glyceraldehyde-3-phosphate dehydrogenase at 3.0 angstroms resolution
Class: oxidoreductase(aldehyde(d)-nad(a))
Keywords: oxidoreductase(aldehyde(d)-nad(a))
Deposited on 1988-01-04, released 1989-07-12
The last revision prior to the SCOP 1.75 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.218
AEROSPACI score: 0.04 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: apo-d-glyceraldehyde-3-phosphate dehydrogenase
    Species: Homarus americanus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d4gpd11, d4gpd12
  • Chain '2':
    Compound: apo-d-glyceraldehyde-3-phosphate dehydrogenase
    Species: Homarus americanus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d4gpd21, d4gpd22
  • Chain '3':
    Compound: apo-d-glyceraldehyde-3-phosphate dehydrogenase
    Species: Homarus americanus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d4gpd31, d4gpd32
  • Chain '4':
    Compound: apo-d-glyceraldehyde-3-phosphate dehydrogenase
    Species: Homarus americanus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d4gpd41, d4gpd42
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain '1':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4gpd1 (1:)
skigingfgrigrlvlraalscgaqvvavndpfialeymvymfkydsthgvfkgevkmed
galvvdgkkitvfnemkpenipwskagaeyivestgvfttiekasahfkggakkvvisap
sadapmfvcgvnlekyskdmtvvsnascttnclapvakvlhenfeiveglmttvhavtat
qktvdgpsakdwrggrgaaqniipsstgaakavgkvipeldgkltgmafrvptpdvsvvd
ltvrlgkecsyddikaamktasegplqgflgyteddvvssdfigdnrssifdakagiqls
ktfvkvvswydnefgysqrvidllkhmqkvdsa

  • Chain '2':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4gpd2 (2:)
skigingfgrigrlvlraalscgaqvvavndpfialeymvymfkydsthgvfkgevkmed
galvvdgkkitvfnemkpenipwskagaeyivestgvfttiekasahfkggakkvvisap
sadapmfvcgvnlekyskdmtvvsnascttnclapvakvlhenfeiveglmttvhavtat
qktvdgpsakdwrggrgaaqniipsstgaakavgkvipeldgkltgmafrvptpdvsvvd
ltvrlgkecsyddikaamktasegplqgflgyteddvvssdfigdnrssifdakagiqls
ktfvkvvswydnefgysqrvidllkhmqkvdsa

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4gpd3 (3:)
skigingfgrigrlvlraalscgaqvvavndpfialeymvymfkydsthgvfkgevkmed
galvvdgkkitvfnemkpenipwskagaeyivestgvfttiekasahfkggakkvvisap
sadapmfvcgvnlekyskdmtvvsnascttnclapvakvlhenfeiveglmttvhavtat
qktvdgpsakdwrggrgaaqniipsstgaakavgkvipeldgkltgmafrvptpdvsvvd
ltvrlgkecsyddikaamktasegplqgflgyteddvvssdfigdnrssifdakagiqls
ktfvkvvswydnefgysqrvidllkhmqkvdsa

  • Chain '4':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4gpd4 (4:)
skigingfgrigrlvlraalscgaqvvavndpfialeymvymfkydsthgvfkgevkmed
galvvdgkkitvfnemkpenipwskagaeyivestgvfttiekasahfkggakkvvisap
sadapmfvcgvnlekyskdmtvvsnascttnclapvakvlhenfeiveglmttvhavtat
qktvdgpsakdwrggrgaaqniipsstgaakavgkvipeldgkltgmafrvptpdvsvvd
ltvrlgkecsyddikaamktasegplqgflgyteddvvssdfigdnrssifdakagiqls
ktfvkvvswydnefgysqrvidllkhmqkvdsa