PDB entry 4gpc

View 4gpc on RCSB PDB site
Description: Structure of the biliverdin-HmuO, heme oxygenase from Corynebacterium diphtheriae
Class: Oxidoreductase
Keywords: helix, heme degradation, heme, Oxidoreductase
Deposited on 2012-08-20, released 2013-08-21
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-08-21, with a file datestamp of 2013-08-16.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.17
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Heme oxygenase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4gpca_
  • Chain 'B':
    Compound: Heme oxygenase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4gpcb_
  • Chain 'C':
    Compound: Heme oxygenase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4gpcc_
  • Heterogens: BLA, SO4, ASC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gpcA (A:)
mttataglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqav
davrasgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnv
dgpalvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyrekl
nnlelsdeqrehllkeatdafvfnhqvfadlgkgl

    Sequence, based on observed residues (ATOM records): (download) 
    >4gpcA (A:)
ataglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqavdav
rasgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnvdgp
alvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyreklnnl
elsdeqrehllkeatdafvfnhqvfadlgkgl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4gpcB (B:)
mttataglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqav
davrasgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnv
dgpalvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyrekl
nnlelsdeqrehllkeatdafvfnhqvfadlgkgl

    Sequence, based on observed residues (ATOM records): (download) 
    >4gpcB (B:)
taglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqavdavr
asgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnvdgpa
lvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyreklnnle
lsdeqrehllkeatdafvfnhqvfadlgkgl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4gpcC (C:)
mttataglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqav
davrasgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnv
dgpalvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyrekl
nnlelsdeqrehllkeatdafvfnhqvfadlgkgl

    Sequence, based on observed residues (ATOM records): (download) 
    >4gpcC (C:)
aglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqavdavra
sgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnvdgpal
vahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyreklnnlel
sdeqrehllkeatdafvfnhqvfadlgk