PDB entry 4gnm

View 4gnm on RCSB PDB site
Description: Structure of rat cytosolic PEPCK Ld_2g in complex with oxalate and GTP
Class: lyase
Keywords: kinase, gluconeogenesis, LYASE
Deposited on 2012-08-17, released 2013-07-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P07379 (Start-462)
    • Uniprot P07379 (465-612)
      • linker (463-464)
    Domains in SCOPe 2.08: d4gnma1, d4gnma2
  • Heterogens: GTP, MN, NA, OXL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gnmA (A:)
mppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahm
qeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmsee
dfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsv
lealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsl
lgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptl
pgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnv
aetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpaw
espegvpiegiifggrrpagvplvyealswqhgvfvgaamrseggimhdpfamrpffgyn
fgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegeds
akltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeie
relralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >4gnmA (A:)
qlhldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqeegv
irklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseedfeka
fnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvlealg
dgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllgkkc
falriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkv
ecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsd
ggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawespeg
vpiegiifggrrpagvplvyealswqhgvfvgaamrseggimhdpfamrpffgynfgkyl
ahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltp
igyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelra
lkqrisqm