PDB entry 4gek

View 4gek on RCSB PDB site
Description: Crystal Structure of wild-type CmoA from E.coli
Class: transferase
Keywords: Structural Genomics, PSI-Biology, New York Structural Genomics Research Consortium, NYSGRC, Rossmann fold, synthase, SAM prephenate, TRANSFERASE
Deposited on 2012-08-02, released 2012-10-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tRNA (cmo5U34)-methyltransferase
    Species: Escherichia coli [TaxId:511145]
    Gene: cmoA
    Database cross-references and differences (RAF-indexed):
    • PDB 4GEK (Start-260)
    Domains in SCOPe 2.08: d4geka_
  • Chain 'G':
    Compound: tRNA (cmo5U34)-methyltransferase
    Species: Escherichia coli [TaxId:511145]
    Gene: cmoA
    Database cross-references and differences (RAF-indexed):
    • PDB 4GEK
    Domains in SCOPe 2.08: d4gekg_
  • Heterogens: SO4, GEK, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gekA (A:)
mahhhhhhvddddkmshrdtlfsapiarlgdwtfdervaevfpdmiqrsvpgysniismi
gmlaerfvqpgtqvydlgcslgaatlsvrrnihhdnckiiaidnspamiercrrhidayk
aptpvdviegdirdiaienasmvvlnftlqflepserqalldkiyqglnpggalvlsekf
sfedakvgellfnmhhdfkrangyseleisqkrsmlenvmltdsvethkarlhkagfehs
elwfqcfnfgslvalkaedaa

    Sequence, based on observed residues (ATOM records): (download) 
    >4gekA (A:)
wtfdervaevfpdmiqrsvpgysniismigmlaerfvqpgtqvydlgcslgaatlsvrrn
ihhdnckiiaidnspamiercrrhidaykaptpvdviegdirdiaienasmvvlnftlqf
lepserqalldkiyqglnpggalvlsekfsfedakvgellfnmhhdfkrangyseleisq
krsmlenvmltdsvethkarlhkagfehselwfqcfnfgslvalkaedaa

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4gekG (G:)
mahhhhhhvddddkmshrdtlfsapiarlgdwtfdervaevfpdmiqrsvpgysniismi
gmlaerfvqpgtqvydlgcslgaatlsvrrnihhdnckiiaidnspamiercrrhidayk
aptpvdviegdirdiaienasmvvlnftlqflepserqalldkiyqglnpggalvlsekf
sfedakvgellfnmhhdfkrangyseleisqkrsmlenvmltdsvethkarlhkagfehs
elwfqcfnfgslvalkaedaa

    Sequence, based on observed residues (ATOM records): (download) 
    >4gekG (G:)
lgdwtfdervaevfpdmiqrsvpgysniismigmlaerfvqpgtqvydlgcslgaatlsv
rrnihhdnckiiaidnspamiercrrhidaykaptpvdviegdirdiaienasmvvlnft
lqflepserqalldkiyqglnpggalvlsekfsfedakvgellfnmhhdfkrangysele
isqkrsmlenvmltdsvethkarlhkagfehselwfqcfnfgslvalkaed