PDB entry 4gef

View 4gef on RCSB PDB site
Description: Product complex of Lumazine Synthase from Candida glabrata
Class: transferase
Keywords: Transferase
Deposited on 2012-08-01, released 2012-08-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2013-05-29, with a file datestamp of 2013-05-24.
Experiment type: XRAY
Resolution: 2.24 Å
R-factor: 0.201
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gefa_
  • Chain 'B':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gefb_
  • Chain 'C':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gefc_
  • Chain 'D':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gefd_
  • Chain 'E':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gefe_
  • Chain 'F':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4geff_
  • Chain 'G':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gefg_
  • Chain 'H':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gefh_
  • Chain 'I':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gefi_
  • Chain 'J':
    Compound: 6,7-dimethyl-8-ribityllumazine synthase
    Species: Candida glabrata [TaxId:284593]
    Gene: CAGL0B01419g, RIB4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gefj_
  • Heterogens: SO4, DLZ, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gefA (A:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefA (A:)
qnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsfelpygskr
faekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvifglltclt
eeqalaragidegktmhnhgedwgaaavematkfgana

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4gefB (B:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefB (B:)
qnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsfelpygskr
faekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvifglltclt
eeqalaragidegktmhnhgedwgaaavematkfgana

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4gefC (C:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefC (C:)
qnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsfelpygskr
faekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvifglltclt
eeqalaragidegktmhnhgedwgaaavematkfgana

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4gefD (D:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefD (D:)
vkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsf
elpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvi
fglltclteeqalaragidegktmhnhgedwgaaavematkfgan

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4gefE (E:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefE (E:)
qnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsfelpygskr
faekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvifglltclt
eeqalaragidegktmhnhgedwgaaavematkfgan

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4gefF (F:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefF (F:)
qnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsfelpygskr
faekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvifglltclt
eeqalaragidegktmhnhgedwgaaavematkfgan

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4gefG (G:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefG (G:)
qldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsfelpyg
skrfaekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvifgllt
clteeqalaragidegktmhnhgedwgaaavematkfgan

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4gefH (H:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefH (H:)
qnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsfelpygskr
faekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvifglltclt
eeqalaragidegktmhnhgedwgaaavematkfgana

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >4gefI (I:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefI (I:)
qnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsfelpygskr
faekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvifglltclt
eeqalaragidegktmhnhgedwgaaavematkfgana

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >4gefJ (J:)
mrgshhhhhhgsavkglgqldqnydgsklrvgiiharwnrviidalvkgaidrmlslgvk
eeniivetvpgsfelpygskrfaekqakkgepldvvipigvlikgstmhfeyisdsttqa
imnlqdkinipvifglltclteeqalaragidegktmhnhgedwgaaavematkfgana

    Sequence, based on observed residues (ATOM records): (download) 
    >4gefJ (J:)
qnydgsklrvgiiharwnrviidalvkgaidrmlslgvkeeniivetvpgsfelpygskr
faekqakkgepldvvipigvlikgstmhfeyisdsttqaimnlqdkinipvifglltclt
eeqalaragidegktmhnhgedwgaaavematkfgan