PDB entry 4gdh

View 4gdh on RCSB PDB site
Description: Schizosaccharomyces pombe DJ-1
Class: unknown function
Keywords: Unknown function, cysteine oxidation
Deposited on 2012-07-31, released 2012-08-15
The last revision prior to the SCOPe 2.04 freeze date was dated 2012-12-19, with a file datestamp of 2012-12-14.
Experiment type: XRAY
Resolution: 1.05 Å
R-factor: 0.12
AEROSPACI score: 0.9 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized protein C22E12.03c
    Species: Schizosaccharomyces pombe [TaxId:4896]
    Gene: SPAC22E12.03c
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4gdha_
  • Chain 'B':
    Compound: Uncharacterized protein C22E12.03c
    Species: Schizosaccharomyces pombe [TaxId:4896]
    Gene: SPAC22E12.03c
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4gdhb_
  • Chain 'C':
    Compound: Uncharacterized protein C22E12.03c
    Species: Schizosaccharomyces pombe [TaxId:4896]
    Gene: SPAC22E12.03c
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4gdhc_
  • Chain 'D':
    Compound: Uncharacterized protein C22E12.03c
    Species: Schizosaccharomyces pombe [TaxId:4896]
    Gene: SPAC22E12.03c
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4gdhd_
  • Heterogens: EDO, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4gdhA (A:)
    gshmvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrs
    ykeipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtlta
    ktsglpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvas
    kdkynavykslsmp
    

    Sequence, based on observed residues (ATOM records): (download)
    >4gdhA (A:)
    vkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrsykei
    psaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtltaktsg
    lpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvaskdky
    navykslsmp
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4gdhB (B:)
    gshmvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrs
    ykeipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtlta
    ktsglpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvas
    kdkynavykslsmp
    

    Sequence, based on observed residues (ATOM records): (download)
    >4gdhB (B:)
    mvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrsyke
    ipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtltakts
    glpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvaskdk
    ynavykslsmp
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4gdhC (C:)
    gshmvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrs
    ykeipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtlta
    ktsglpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvas
    kdkynavykslsmp
    

    Sequence, based on observed residues (ATOM records): (download)
    >4gdhC (C:)
    mvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrsyke
    ipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtltakts
    glpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvaskdk
    ynavykslsmp
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4gdhD (D:)
    gshmvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrs
    ykeipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtlta
    ktsglpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvas
    kdkynavykslsmp
    

    Sequence, based on observed residues (ATOM records): (download)
    >4gdhD (D:)
    mvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrsyke
    ipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtltakts
    glpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvaskdk
    ynavykslsmp