PDB entry 4gdh
View 4gdh on RCSB PDB site
Description: Schizosaccharomyces pombe DJ-1
Class: unknown function
Keywords: Unknown function, cysteine oxidation
Deposited on
2012-07-31, released
2012-08-15
The last revision prior to the SCOPe 2.04 freeze date was dated
2012-12-19, with a file datestamp of
2012-12-14.
Experiment type: XRAY
Resolution: 1.05 Å
R-factor: 0.12
AEROSPACI score: 0.9
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Uncharacterized protein C22E12.03c
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: SPAC22E12.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4gdha_ - Chain 'B':
Compound: Uncharacterized protein C22E12.03c
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: SPAC22E12.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4gdhb_ - Chain 'C':
Compound: Uncharacterized protein C22E12.03c
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: SPAC22E12.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4gdhc_ - Chain 'D':
Compound: Uncharacterized protein C22E12.03c
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: SPAC22E12.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4gdhd_ - Heterogens: EDO, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4gdhA (A:)
gshmvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrs
ykeipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtlta
ktsglpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvas
kdkynavykslsmp
Sequence, based on observed residues (ATOM records): (download)
>4gdhA (A:)
vkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrsykei
psaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtltaktsg
lpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvaskdky
navykslsmp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4gdhB (B:)
gshmvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrs
ykeipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtlta
ktsglpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvas
kdkynavykslsmp
Sequence, based on observed residues (ATOM records): (download)
>4gdhB (B:)
mvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrsyke
ipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtltakts
glpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvaskdk
ynavykslsmp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4gdhC (C:)
gshmvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrs
ykeipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtlta
ktsglpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvas
kdkynavykslsmp
Sequence, based on observed residues (ATOM records): (download)
>4gdhC (C:)
mvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrsyke
ipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtltakts
glpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvaskdk
ynavykslsmp
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4gdhD (D:)
gshmvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrs
ykeipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtlta
ktsglpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvas
kdkynavykslsmp
Sequence, based on observed residues (ATOM records): (download)
>4gdhD (D:)
mvkvclfvadgtdeiefsapwgifkraeipidsvyvgenkdrlvkmsrdvemyanrsyke
ipsaddfakqydiaiipggglgaktlsttpfvqqvvkefykkpnkwigmicagtltakts
glpnkqitghpsvrgqleeggykyldqpvvleenlitsqgpgtamlfglklleqvaskdk
ynavykslsmp