PDB entry 4gd9
View 4gd9 on RCSB PDB site
Description: Circular Permuted Streptavidin N49/G48
Class: Biotin-Binding Protein
Keywords: biotin-binding protein, biotin, circular permutation
Deposited on
2012-07-31, released
2013-06-05
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-15, with a file datestamp of
2017-11-10.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: streptavidin
Species: Streptomyces avidinii [TaxId:1895]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4gd9a_ - Chain 'B':
Compound: streptavidin
Species: Streptomyces avidinii [TaxId:1895]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4gd9b_ - Chain 'C':
Compound: streptavidin
Species: Streptomyces avidinii [TaxId:1895]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4gd9c_ - Chain 'D':
Compound: streptavidin
Species: Streptomyces avidinii [TaxId:1895]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4gd9d_ - Heterogens: BTN, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4gd9A (A:)
mnaesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintq
wlltsgtteanawkstlvghdtftkvkpsaasgggsaeagitgtwynqlgstfivtagad
galtgtyesavg
Sequence, based on observed residues (ATOM records): (download)
>4gd9A (A:)
naesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintqw
lltsgtteanawkstlvghdtftkveagitgtwynqlgstfivtagadgaltgtyesavg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4gd9B (B:)
mnaesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintq
wlltsgtteanawkstlvghdtftkvkpsaasgggsaeagitgtwynqlgstfivtagad
galtgtyesavg
Sequence, based on observed residues (ATOM records): (download)
>4gd9B (B:)
naesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintqw
lltsgtteanawkstlvghdtftkvkpsaasgggsaeagitgtwynqlgstfivtagadg
altgtyesavg
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4gd9C (C:)
mnaesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintq
wlltsgtteanawkstlvghdtftkvkpsaasgggsaeagitgtwynqlgstfivtagad
galtgtyesavg
Sequence, based on observed residues (ATOM records): (download)
>4gd9C (C:)
naesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintqw
lltsgtteanawkstlvghdtftkvksaeagitgtwynqlgstfivtagadgaltgtyes
avg
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4gd9D (D:)
mnaesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintq
wlltsgtteanawkstlvghdtftkvkpsaasgggsaeagitgtwynqlgstfivtagad
galtgtyesavg
Sequence, based on observed residues (ATOM records): (download)
>4gd9D (D:)
naesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqyvggaearintqw
lltsgtteanawkstlvghdtftkvkaeagitgtwynqlgstfivtagadgaltgtyesa
vg