PDB entry 4g89
View 4g89 on RCSB PDB site
Description: Crystal structure of k. pneumoniae mta/adohcy nucleosidase in complex with fragmented s-adenosyl-l-homocysteine
Class: hydrolase
Keywords: mixed alpha/beta, dimer, hydrolase, s-adenosylhomocysteine, cleavage
Deposited on
2012-07-23, released
2012-09-19
The last revision prior to the SCOPe 2.08 freeze date was dated
2012-09-19, with a file datestamp of
2012-09-14.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.163
AEROSPACI score: 0.43
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Species: Klebsiella pneumoniae subsp. pneumoniae [TaxId:272620]
Gene: KPN 00174, KPN78578_01730, KPN_00174, mtnN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4g89a1, d4g89a2 - Chain 'B':
Compound: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Species: Klebsiella pneumoniae subsp. pneumoniae [TaxId:272620]
Gene: KPN 00174, KPN78578_01730, KPN_00174, mtnN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4g89b1, d4g89b2 - Heterogens: ADE, SAH, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4g89A (A:)
iasksmkigiigameeevtllrdkienrqtitiggseiytgqlhgvdvallksgigkvaa
amgatlllercqpdviintgsagglastlkvgdivvsdearyhdadvtafgyeygqlpgc
pagfkadeklvaaaescikaldlnavrglivsgdafingsvglakirhnfpqaiavemea
taiahvchnfkvpfvvvraisdvadqqshlsfeeflavaarqstlmvenlvqnlarg
Sequence, based on observed residues (ATOM records): (download)
>4g89A (A:)
smkigiigameeevtllrdkienrqtitiggseiytgqlhgvdvallksgigkvaaamga
tlllercqpdviintgsagglastlkvgdivvsdearyhdadvtafgyeygqlpgcpagf
kadeklvaaaescikaldlnavrglivsgdafingsvglakirhnfpqaiavemeataia
hvchnfkvpfvvvraisdvadqqshlsfeeflavaarqstlmvenlvqnlarg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4g89B (B:)
iasksmkigiigameeevtllrdkienrqtitiggseiytgqlhgvdvallksgigkvaa
amgatlllercqpdviintgsagglastlkvgdivvsdearyhdadvtafgyeygqlpgc
pagfkadeklvaaaescikaldlnavrglivsgdafingsvglakirhnfpqaiavemea
taiahvchnfkvpfvvvraisdvadqqshlsfeeflavaarqstlmvenlvqnlarg
Sequence, based on observed residues (ATOM records): (download)
>4g89B (B:)
smkigiigameeevtllrdkienrqtitiggseiytgqlhgvdvallksgigkvaaamga
tlllercqpdviintgsagglastlkvgdivvsdearyhdadvtafgyeygqlpgcpagf
kadeklvaaaescikaldlnavrglivsgdafingsvglakirhnfpqaiavemeataia
hvchnfkvpfvvvraisdvadqqshlsfeeflavaarqstlmvenlvqnlarg