PDB entry 4g59
View 4g59 on RCSB PDB site
Description: Crystal structure of the murine cytomegalovirus MHC-I homolog m152 with ligand RAE-1 gamma
Class: immune system
Keywords: MHC-I Fold, Immunoevasion, Stress induced ligand, IMMUNE SYSTEM
Deposited on
2012-07-17, released
2012-12-19
The last revision prior to the SCOPe 2.05 freeze date was dated
2013-06-19, with a file datestamp of
2013-06-14.
Experiment type: XRAY
Resolution: 2.44 Å
R-factor: 0.203
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Retinoic acid early-inducible protein 1-gamma
Species: Mus musculus [TaxId:10090]
Gene: Raet1c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4g59a_ - Chain 'B':
Compound: Retinoic acid early-inducible protein 1-gamma
Species: Mus musculus [TaxId:10090]
Gene: Raet1c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4g59b_ - Chain 'C':
Compound: M152 protein
Species: Murid herpesvirus 1 [TaxId:10366]
Gene: m152
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: M152 protein
Species: Murid herpesvirus 1 [TaxId:10366]
Gene: m152
Database cross-references and differences (RAF-indexed):
- Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4g59A (A:)
mlddahslrcnltikaptpadplwyeakclvdeililhlsninktmtsgdpgetanatev
gecltqpvndlcqklrdkvsntkvdthktngyphlqvtmiypqsqgqtpsatwefnisds
yfftfytenmswrsandesgvimnkwnddgdlvqrlkyfipecrqkideflkqskekprs
tsrspsitqltstsplpppshstsk
Sequence, based on observed residues (ATOM records): (download)
>4g59A (A:)
ahslrcnltikaptpadplwyeakclvdeililhlsninkanatevgecltqpvndlcqk
lrdkvsntkvdthktngyphlqvtmiypqsqgqtpsatwefnisdsyfftfytenmswrs
andesgvimnkwnddgdlvqrlkyfipecrqkideflkqske
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4g59B (B:)
mlddahslrcnltikaptpadplwyeakclvdeililhlsninktmtsgdpgetanatev
gecltqpvndlcqklrdkvsntkvdthktngyphlqvtmiypqsqgqtpsatwefnisds
yfftfytenmswrsandesgvimnkwnddgdlvqrlkyfipecrqkideflkqskekprs
tsrspsitqltstsplpppshstsk
Sequence, based on observed residues (ATOM records): (download)
>4g59B (B:)
ahslrcnltikaptpadplwyeakclvdeililhlsninktanatevgecltqpvndlcq
klrdkvsntkvdthktngyphlqvtmiypqsqgqtpsatwefnisdsyfftfytenmswr
sandesgvimnkwnddgdlvqrlkyfipecrqkideflkqske
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.