PDB entry 4f53

View 4f53 on RCSB PDB site
Description: Crystal structure of a susd homolog (BACOVA_04803) from Bacteroides ovatus ATCC 8483 at 2.25 A resolution
Class: sugar binding protein
Keywords: TPR-like protein, mucin o-glycan binding, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, SUGAR BINDING PROTEIN
Deposited on 2012-05-11, released 2012-07-11
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-07-11, with a file datestamp of 2012-07-06.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.15
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SusD homolog
    Species: Bacteroides ovatus [TaxId:411476]
    Gene: BACOVA_04803
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4f53a_
  • Chain 'B':
    Compound: SusD homolog
    Species: Bacteroides ovatus [TaxId:411476]
    Gene: BACOVA_04803
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4f53b_
  • Heterogens: ACT, CA, GOL, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4f53A (A:)
gctgnfedynknphepdqndmgvdwylvrslalnlqdlmmpeqenfsqyvdclmagafsg
yvadsnlgtgwsgryatynpsddwkkipfndfyskfypdyfnlknqsddelflslaelyr
ivvmlrvtdtygpipyskvgaanaikspydsqqavyakmledldniitvlgkfgnqsfss
sadriyngntsawykfanslklrmamrtcyvagfnvngktsqqlaeeavaagvmtaatdg
ayrkvadhnpwqrfmvlwsdarisadltcymnayndprreayydkstfgtvsgnaytgee
syvglrrgilqgqynswsqgsscmkvttsdnivvfrasevaflraegalrnwnmggtakd
fyeegirlsfeengitsgvenylastgkveaykdplkgqsaqtydysgaintnvtvawsg
gdfeksleqiitqkwianfpngmeswteyrrtgypklmpmaanasggivndaegarrmpy
ptdeyrenresveaavatltqesktkrgdtmathvwwdck

    Sequence, based on observed residues (ATOM records): (download) 
    >4f53A (A:)
vdwylvrslalnlqdlmmpeqenfsqyvdclmagafsgyvadsnlgtgwsgryatynpsd
dwkkipfndfyskfypdyfnlknqsddelflslaelyrivvmlrvtdtygpipyskvgaa
naikspydsqqavyakmledldniitvlgkfgnqsfsssadriyngntsawykfanslkl
rmamrtcyvagfnvngktsqqlaeeavaagvmtaatdgayrkvadhnpwqrfmvlwsdar
isadltcymnayndprreayydkstfgtvsgnaytgeesyvglrrgilqgqynswsqgss
cmkvttsdnivvfrasevaflraegalrnwnmggtakdfyeegirlsfeengitsgveny
lastgkveaykdplkgqsaqtydysgaintnvtvawsggdfeksleqiitqkwianfpng
meswteyrrtgypklmpmaanasggivndaegarrmpyptdeyrenresveaavatltqe
sktkrgdtmathvwwdck

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4f53B (B:)
gctgnfedynknphepdqndmgvdwylvrslalnlqdlmmpeqenfsqyvdclmagafsg
yvadsnlgtgwsgryatynpsddwkkipfndfyskfypdyfnlknqsddelflslaelyr
ivvmlrvtdtygpipyskvgaanaikspydsqqavyakmledldniitvlgkfgnqsfss
sadriyngntsawykfanslklrmamrtcyvagfnvngktsqqlaeeavaagvmtaatdg
ayrkvadhnpwqrfmvlwsdarisadltcymnayndprreayydkstfgtvsgnaytgee
syvglrrgilqgqynswsqgsscmkvttsdnivvfrasevaflraegalrnwnmggtakd
fyeegirlsfeengitsgvenylastgkveaykdplkgqsaqtydysgaintnvtvawsg
gdfeksleqiitqkwianfpngmeswteyrrtgypklmpmaanasggivndaegarrmpy
ptdeyrenresveaavatltqesktkrgdtmathvwwdck

    Sequence, based on observed residues (ATOM records): (download) 
    >4f53B (B:)
vdwylvrslalnlqdlmmpeqenfsqyvdclmagafsgyvadsnlgtgwsgryatynpsd
dwkkipfndfyskfypdyfnlknqsddelflslaelyrivvmlrvtdtygpipyskvgaa
naikspydsqqavyakmledldniitvlgkfgnqsfsssadriyngntsawykfanslkl
rmamrtcyvagfnvngktsqqlaeeavaagvmtaatdgayrkvadhnpwqrfmvlwsdar
isadltcymnayndprreayydkstfgtvsgnaytgeesyvglrrgilqgqynswsqgss
cmkvttsdnivvfrasevaflraegalrnwnmggtakdfyeegirlsfeengitsgveny
lastgkveaykdplkgqsaqtydysgaintnvtvawsggdfeksleqiitqkwianfpng
meswteyrrtgypklmpmaanasggivndaegarrmpyptdeyrenresveaavatltqe
sktkrgdtmathvwwdck