PDB entry 4eow
View 4eow on RCSB PDB site
Description: Crystal structure of a disease-associated anti-human GM-CSF autoantibody MB007
Class: immune system
Keywords: Immunsystem, alpha-helical stretch in CDR3-H, protein-docking, Immunoglobulin IgG1 (lambda), autoantibody causing PAP, GM-CSF, IMMUNE SYSTEM
Deposited on
2012-04-16, released
2012-08-22
The last revision prior to the SCOPe 2.04 freeze date was dated
2012-10-10, with a file datestamp of
2012-10-05.
Experiment type: XRAY
Resolution: 1.97 Å
R-factor: 0.226
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: MB007 human IgG1 Fab fragment heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 4EOW (0-126)
- Uniprot P01857 (127-227)
- Chain 'L':
Compound: MB007 IgG1 Fab fragment light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 4EOW (Start-110)
- Uniprot P0CG05 (111-End)
Domains in SCOPe 2.04: d4eowl1, d4eowl2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4eowL (L:)
qsvltqppsasgtpgqsvniscsgsssnignsyvywyqqlpgtapklliyrnnrrpsgvp
drfsgsksdtsaslaisglrsedeadyycatwddslsgrlfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>4eowL (L:)
svltqppsasgtpgqsvniscsgsssnignsyvywyqqlpgtapklliyrnnrrpsgvpd
rfsgsksdtsaslaisglrsedeadyycatwddslsgrlfgggtkltvlgqpkaapsvtl
fppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassy
lsltpeqwkshrsyscqvthegstvektvap