PDB entry 4egf

View 4egf on RCSB PDB site
Description: Crystal structure of a L-xylulose reductase from Mycobacterium smegmatis
Class: oxidoreductase
Keywords: Structural Genomics, SSGCID, Seattle Structural Genomics Center for Infectious Disease, OXIDOREDUCTASE
Deposited on 2012-03-30, released 2012-05-02
The last revision prior to the SCOPe 2.04 freeze date was dated 2012-05-02, with a file datestamp of 2012-04-27.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.19
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-xylulose reductase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Gene: MSMEG_3262
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4egfa_
  • Chain 'B':
    Compound: L-xylulose reductase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Gene: MSMEG_3262
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4egfb_
  • Chain 'C':
    Compound: L-xylulose reductase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Gene: MSMEG_3262
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4egfc_
  • Chain 'D':
    Compound: L-xylulose reductase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Gene: MSMEG_3262
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4egfd_
  • Chain 'E':
    Compound: L-xylulose reductase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Gene: MSMEG_3262
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4egfe_
  • Chain 'F':
    Compound: L-xylulose reductase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Gene: MSMEG_3262
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4egff_
  • Chain 'G':
    Compound: L-xylulose reductase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Gene: MSMEG_3262
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4egfg_
  • Chain 'H':
    Compound: L-xylulose reductase
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:246196]
    Gene: MSMEG_3262
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4egfh_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4egfA (A:)
    gpgsmtttddryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaa
    rralgeqfgtdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpq
    lfdatiavnlrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvm
    atkvlarelgphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsda
    vvwlasdaasmingvdipvdggytmg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4egfA (A:)
    dryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaarralgeqfg
    tdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpqlfdatiavn
    lrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvmatkvlarel
    gphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsdavvwlasdaa
    smingvdipvdggytmg
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4egfB (B:)
    gpgsmtttddryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaa
    rralgeqfgtdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpq
    lfdatiavnlrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvm
    atkvlarelgphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsda
    vvwlasdaasmingvdipvdggytmg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4egfB (B:)
    dryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaarralgeqfg
    tdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpqlfdatiavn
    lrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvmatkvlarel
    gphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsdavvwlasdaa
    smingvdipvdggytmg
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4egfC (C:)
    gpgsmtttddryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaa
    rralgeqfgtdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpq
    lfdatiavnlrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvm
    atkvlarelgphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsda
    vvwlasdaasmingvdipvdggytmg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4egfC (C:)
    dryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaarralgeqfg
    tdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpqlfdatiavn
    lrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvmatkvlarel
    gphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsdavvwlasdaa
    smingvdipvdggytmg
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4egfD (D:)
    gpgsmtttddryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaa
    rralgeqfgtdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpq
    lfdatiavnlrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvm
    atkvlarelgphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsda
    vvwlasdaasmingvdipvdggytmg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4egfD (D:)
    dryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaarralgeqfg
    tdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpqlfdatiavn
    lrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvmatkvlarel
    gphgiransvcptvvltemgqrvwksapmiariplgrfavphevsdavvwlasdaasmin
    gvdipvdggytmg
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4egfE (E:)
    gpgsmtttddryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaa
    rralgeqfgtdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpq
    lfdatiavnlrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvm
    atkvlarelgphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsda
    vvwlasdaasmingvdipvdggytmg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4egfE (E:)
    dryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaarralgeqfg
    tdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpqlfdatiavn
    lrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvmatkvlarel
    gphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsdavvwlasdaa
    smingvdipvdggytmg
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4egfF (F:)
    gpgsmtttddryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaa
    rralgeqfgtdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpq
    lfdatiavnlrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvm
    atkvlarelgphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsda
    vvwlasdaasmingvdipvdggytmg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4egfF (F:)
    dryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaarralgeqfg
    tdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpqlfdatiavn
    lrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvmatkvlarel
    gphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsdavvwlasdaa
    smingvdipvdggytmg
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4egfG (G:)
    gpgsmtttddryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaa
    rralgeqfgtdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpq
    lfdatiavnlrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvm
    atkvlarelgphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsda
    vvwlasdaasmingvdipvdggytmg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4egfG (G:)
    dryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaarralgeqfg
    tdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpqlfdatiavn
    lrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvmatkvlarel
    gphgiransvcptvvltemgqrvweaksapmiariplgrfavphevsdavvwlasdaasm
    ingvdipvdggytmg
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >4egfH (H:)
    gpgsmtttddryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaa
    rralgeqfgtdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpq
    lfdatiavnlrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvm
    atkvlarelgphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsda
    vvwlasdaasmingvdipvdggytmg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4egfH (H:)
    dryagvlrldgkralitgatkgigadiarafaaagarlvlsgrdvseldaarralgeqfg
    tdvhtvaidlaepdapaelarraaeafggldvlvnnagishpqpvvdtdpqlfdatiavn
    lrapallasavgkamvaageggaiitvasaaalaplpdhyayctskaglvmatkvlarel
    gphgiransvcptvvltemgqrvwgdeaksapmiariplgrfavphevsdavvwlasdaa
    smingvdipvdggytmg