PDB entry 4eg0

View 4eg0 on RCSB PDB site
Description: Crystal Structure of D-alanine--D-alanine ligase from Burkholderia ambifaria
Class: ligase
Keywords: Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID, LIGASE
Deposited on 2012-03-30, released 2012-05-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-10-30, with a file datestamp of 2013-10-25.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.175
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: d-alanine--d-alanine ligase
    Species: Burkholderia ambifaria [TaxId:398577]
    Gene: ddl, BamMC406_0490
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4eg0a1, d4eg0a2
  • Chain 'B':
    Compound: d-alanine--d-alanine ligase
    Species: Burkholderia ambifaria [TaxId:398577]
    Gene: ddl, BamMC406_0490
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4eg0b1, d4eg0b2
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4eg0A (A:)
gpgsmsgidpkrfgkvavlfggesaerevsltsgrlvlqglrdagidahpfdpaerplsa
lkdegfvrafnalhggygengqiqgaldfygirytgsgvlgsalgldkfrtklvwqqtgv
ptppfetvmrgddyaaratdivaklglplfvkpasegssvavlkvktadalpaalseaat
hdkiviveksiegggeytaciagdldlplikivpagefydyhakyvandtqylipcglpa
eqetelkriarrafdvlgctdwgradfmldaagnayflevntapgmtdhslppkaarsig
igyselvvkvlsltlnd

    Sequence, based on observed residues (ATOM records): (download) 
    >4eg0A (A:)
idpkrfgkvavlfggesaerevsltsgrlvlqglrdagidahpfdpaerplsalkdegfv
rafnalhggygengqiqgaldfygirytgsgvlgsalgldkfrtklvwqqtgvptppfet
vmrgddyaaratdivaklglplfvkpasavlkvktadalpaalseaathdkiviveksie
gggeytaciagdldlplikivptqylipcglpaeqetelkriarrafdvlgctdwgradf
mldaagnayflevntapgmtdhslppkaarsigigyselvvkvlsltl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4eg0B (B:)
gpgsmsgidpkrfgkvavlfggesaerevsltsgrlvlqglrdagidahpfdpaerplsa
lkdegfvrafnalhggygengqiqgaldfygirytgsgvlgsalgldkfrtklvwqqtgv
ptppfetvmrgddyaaratdivaklglplfvkpasegssvavlkvktadalpaalseaat
hdkiviveksiegggeytaciagdldlplikivpagefydyhakyvandtqylipcglpa
eqetelkriarrafdvlgctdwgradfmldaagnayflevntapgmtdhslppkaarsig
igyselvvkvlsltlnd

    Sequence, based on observed residues (ATOM records): (download) 
    >4eg0B (B:)
idpkrfgkvavlfggesaerevsltsgrlvlqglrdagidahpfdpaerplsalkdegfv
rafnalhggygengqiqgaldfygirytgsgvlgsalgldkfrtklvwqqtgvptppfet
vmrgddyaaratdivaklglplfvkpasvlkvktadalpaalseahdkiviveksieggg
eytaciagdldlplikivpagefydtqylipcglpaeqetelkriarrafdvlgctdwgr
adfmldaagnayflevntapgmtdhslppkaarsigigyselvvkvlsltl