PDB entry 4ef8

View 4ef8 on RCSB PDB site
Description: Crystal structure of dihydroorotate dehydrogenase from Leishmania major in complex with Phenyl isothiocyanate
Class: Oxidoreductase/Oxidoreductase inhibitor
Keywords: Leishmania major, dihydroorotate dehydrogenase, Phenyl isothiocyanate, pyrd, Oxidoreductase, Oxidoreductase-Oxidoreductase inhibitor complex
Deposited on 2012-03-29, released 2012-12-12
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-05-22, with a file datestamp of 2013-05-17.
Experiment type: XRAY
Resolution: 1.56 Å
R-factor: 0.177
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dihydroorotate dehydrogenase
    Species: Leishmania major [TaxId:5664]
    Gene: DHODH, lmjf16.0530, LMJF_16_0530
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4QEW7 (34-End)
      • expression tag (33)
    Domains in SCOPe 2.06: d4ef8a1, d4ef8a2
  • Chain 'B':
    Compound: dihydroorotate dehydrogenase
    Species: Leishmania major [TaxId:5664]
    Gene: DHODH, lmjf16.0530, LMJF_16_0530
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4QEW7 (34-End)
      • expression tag (32-33)
    Domains in SCOPe 2.06: d4ef8b1, d4ef8b2
  • Heterogens: FMN, 0FI, SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ef8A (A:)
mgsshhhhhhssglvpagshmasmtggqqmgrgsmslqvnllnntfanpfmnaagvmctt
teelvamtesasgslvsksctpalregnptpryqalplgsinsmglpnngfdfylayaae
qhdygkkplflsmsglsmrenvemckrlaavatekgvilelnlscpnvpgkpqvaydfda
mrqcltavsevyphsfgvkmppyfdfahfdaaaeilnefpkvqfitcinsignglvidae
tesvvikpkqgfgglggryvlptalaninafyrrcpgklifgcggvytgedaflhvlaga
smvqvgtalqeegpsiferltsellgvmakkryqtldefrgkvrtldgtaestr

    Sequence, based on observed residues (ATOM records): (download) 
    >4ef8A (A:)
smslqvnllnntfanpfmnaagvmcttteelvamtesasgslvsksctpalregnptpry
qalplgsinsmglpnngfdfylayaaeqhdygkkplflsmsglsmrenvemckrlaavat
ekgvilelnlscpnvpgkpqvaydfdamrqcltavsevyphsfgvkmppyfdfahfdaaa
eilnefpkvqfitcinsignglvidaetesvvikpkqgfgglggryvlptalaninafyr
rcpgklifgcggvytgedaflhvlagasmvqvgtalqeegpsiferltsellgvmakkry
qtldefrgkvrtl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4ef8B (B:)
mgsshhhhhhssglvpagshmasmtggqqmgrgsmslqvnllnntfanpfmnaagvmctt
teelvamtesasgslvsksctpalregnptpryqalplgsinsmglpnngfdfylayaae
qhdygkkplflsmsglsmrenvemckrlaavatekgvilelnlscpnvpgkpqvaydfda
mrqcltavsevyphsfgvkmppyfdfahfdaaaeilnefpkvqfitcinsignglvidae
tesvvikpkqgfgglggryvlptalaninafyrrcpgklifgcggvytgedaflhvlaga
smvqvgtalqeegpsiferltsellgvmakkryqtldefrgkvrtldgtaestr

    Sequence, based on observed residues (ATOM records): (download) 
    >4ef8B (B:)
gsmslqvnllnntfanpfmnaagvmcttteelvamtesasgslvsksctpalregnptpr
yqalplgsinsmglpnngfdfylayaaeqhdygkkplflsmsglsmrenvemckrlaava
tekgvilelnlscpnvpgkpqvaydfdamrqcltavsevyphsfgvkmppyfdfahfdaa
aeilnefpkvqfitcinsignglvidaetesvvikpkqgfgglggryvlptalaninafy
rrcpgklifgcggvytgedaflhvlagasmvqvgtalqeegpsiferltsellgvmakkr
yqtldefrgkvrtl