PDB entry 4e5j

View 4e5j on RCSB PDB site
Description: Crystal structure of avian influenza virus PAn bound to compound 5
Class: viral protein, transcription
Keywords: endonuclease domain, H5N1 subtype, VIRAL PROTEIN, TRANSCRIPTION
Deposited on 2012-03-14, released 2012-08-08
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-07-26, with a file datestamp of 2017-07-21.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Polymerase protein PA
    Species: Influenza A virus [TaxId:284218]
    Gene: PA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5EP34 (0-49)
    • Uniprot Q5EP34 (53-176)
      • linker (49)
      • linker (49)
      • expression tag (177-180)
      • expression tag (176)
      • expression tag (176-177)
      • expression tag (179-180)
      • expression tag (178)
      • expression tag (180)
    Domains in SCOPe 2.07: d4e5ja1, d4e5ja2
  • Chain 'B':
    Compound: Polymerase protein PA
    Species: Influenza A virus [TaxId:284218]
    Gene: PA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5EP34 (0-49)
    • Uniprot Q5EP34 (53-176)
      • linker (49)
      • linker (49)
      • expression tag (176)
      • expression tag (176)
    Domains in SCOPe 2.07: d4e5jb_
  • Chain 'C':
    Compound: Polymerase protein PA
    Species: Influenza A virus [TaxId:284218]
    Gene: PA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5EP34 (0-49)
    • Uniprot Q5EP34 (53-176)
      • linker (49)
      • linker (49)
      • expression tag (176)
      • expression tag (176)
    Domains in SCOPe 2.07: d4e5jc_
  • Chain 'D':
    Compound: Polymerase protein PA
    Species: Influenza A virus [TaxId:284218]
    Gene: PA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5EP34 (0-49)
    • Uniprot Q5EP34 (53-176)
      • linker (49)
      • linker (49)
      • expression tag (176)
      • expression tag (176)
    Domains in SCOPe 2.07: d4e5jd_
  • Heterogens: SO4, 581, MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4e5jA (A:)
medfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdggskhrfeii
egrdrtmawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhtyylekankik
seethihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqseraaa
elalvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >4e5jA (A:)
medfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdggskhrfeii
egrdrtmawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhtyylekankik
seethihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqseraaa
e

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4e5jB (B:)
medfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdggskhrfeii
egrdrtmawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhtyylekankik
seethihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqseraaa
elalvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >4e5jB (B:)
medfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdggskhrfeii
egrdrtmawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhtyylekankik
seethihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqseraaa
e

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4e5jC (C:)
medfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdggskhrfeii
egrdrtmawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhtyylekankik
seethihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqseraaa
elalvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >4e5jC (C:)
medfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdggskhrfeii
egrdrtmawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhtyylekankik
seethihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqseraaa
e

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4e5jD (D:)
medfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdggskhrfeii
egrdrtmawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhtyylekankik
seethihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqseraaa
elalvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >4e5jD (D:)
medfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdggskhrfeii
egrdrtmawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhtyylekankik
seethihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqseraa