PDB entry 4e52

View 4e52 on RCSB PDB site
Description: Crystal structure of Haemophilus Eagan 4A polysaccharide bound human lung surfactant protein D
Class: sugar binding protein
Keywords: Trimeric recombinant collectin fragment, neck+CRD, alpha-helical coiled coil, carbohydrate recognition domain, Lectin, SUGAR BINDING PROTEIN
Deposited on 2012-03-13, released 2013-03-27
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-03-27, with a file datestamp of 2013-03-22.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.192
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pulmonary surfactant-associated protein D
    Species: Homo sapiens [TaxId:9606]
    Gene: SFTPD, COLEC7, PSPD, SFTP4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4e52a1, d4e52a2
  • Chain 'B':
    Compound: Pulmonary surfactant-associated protein D
    Species: Homo sapiens [TaxId:9606]
    Gene: SFTPD, COLEC7, PSPD, SFTP4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4e52b1, d4e52b2
  • Chain 'C':
    Compound: Pulmonary surfactant-associated protein D
    Species: Homo sapiens [TaxId:9606]
    Gene: SFTPD, COLEC7, PSPD, SFTP4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4e52c1, d4e52c2
  • Heterogens: CA, GMH, KD5, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4e52A (A:)
gspglkgdkgipgdkgakgesglpdvaslrqqvealqgqvqhlqaafsqykkvelfpngq
svgekifktagfvkpfteaqllctqaggqlasprsaaenaalqqlvvakneaaflsmtds
ktegkftyptgeslvysnwapgepnddggsedcveiftngkwndracgekrlvvcef

    Sequence, based on observed residues (ATOM records): (download) 
    >4e52A (A:)
vaslrqqvealqgqvqhlqaafsqykkvelfpngqsvgekifktagfvkpfteaqllctq
aggqlasprsaaenaalqqlvvakneaaflsmtdsktegkftyptgeslvysnwapgepn
ddggsedcveiftngkwndracgekrlvvcef

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4e52B (B:)
gspglkgdkgipgdkgakgesglpdvaslrqqvealqgqvqhlqaafsqykkvelfpngq
svgekifktagfvkpfteaqllctqaggqlasprsaaenaalqqlvvakneaaflsmtds
ktegkftyptgeslvysnwapgepnddggsedcveiftngkwndracgekrlvvcef

    Sequence, based on observed residues (ATOM records): (download) 
    >4e52B (B:)
vaslrqqvealqgqvqhlqaafsqykkvelfpngqsvgekifktagfvkpfteaqllctq
aggqlasprsaaenaalqqlvvakneaaflsmtdsktegkftyptgeslvysnwapgepn
ddggsedcveiftngkwndracgekrlvvcef

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4e52C (C:)
gspglkgdkgipgdkgakgesglpdvaslrqqvealqgqvqhlqaafsqykkvelfpngq
svgekifktagfvkpfteaqllctqaggqlasprsaaenaalqqlvvakneaaflsmtds
ktegkftyptgeslvysnwapgepnddggsedcveiftngkwndracgekrlvvcef

    Sequence, based on observed residues (ATOM records): (download) 
    >4e52C (C:)
vaslrqqvealqgqvqhlqaafsqykkvelfpngqsvgekifktagfvkpfteaqllctq
aggqlasprsaaenaalqqlvvakneaaflsmtdsktegkftyptgeslvysnwapgepn
ddggsedcveiftngkwndracgekrlvvcef