PDB entry 4e38
View 4e38 on RCSB PDB site
Description: Crystal structure of probable keto-hydroxyglutarate-aldolase from Vibrionales bacterium SWAT-3 (Target EFI-502156)
Class: lyase
Keywords: lyase
Deposited on
2012-03-09, released
2012-03-21
The last revision prior to the SCOPe 2.03 freeze date was dated
2012-03-21, with a file datestamp of
2012-03-16.
Experiment type: XRAY
Resolution: 1.64 Å
R-factor: 0.172
AEROSPACI score: 0.59
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
Gene: VSWAT3_13722
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4e38a_ - Chain 'B':
Compound: Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
Gene: VSWAT3_13722
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4e38b_ - Chain 'C':
Compound: Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
Gene: VSWAT3_13722
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4e38c_ - Heterogens: CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4e38A (A:)
mhhhhhhssgvdlgtenlyfqsmmstinnqlkalkvipviaidnaediiplgkvlaengl
paaeitfrsdaaveairllrqaqpemligagtilngeqalaakeagatfvvspgfnpntv
racqeigidivpgvnnpstveaalemglttlkffpaeasggismvkslvgpygdirlmpt
ggitpsnidnylaipqvlacggtwmvdkklvtngewdeiarltreiveqvnp
Sequence, based on observed residues (ATOM records): (download)
>4e38A (A:)
fqsmmstinnqlkalkvipviaidnaediiplgkvlaenglpaaeitfrsdaaveairll
rqaqpemligagtilngeqalaakeagatfvvspgfnpntvracqeigidivpgvnnpst
veaalemglttlkffpaeasggismvkslvgpygdirlmptggitpsnidnylaipqvla
cggtwmvdkklvtngewdeiarltreiveqvnp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4e38B (B:)
mhhhhhhssgvdlgtenlyfqsmmstinnqlkalkvipviaidnaediiplgkvlaengl
paaeitfrsdaaveairllrqaqpemligagtilngeqalaakeagatfvvspgfnpntv
racqeigidivpgvnnpstveaalemglttlkffpaeasggismvkslvgpygdirlmpt
ggitpsnidnylaipqvlacggtwmvdkklvtngewdeiarltreiveqvnp
Sequence, based on observed residues (ATOM records): (download)
>4e38B (B:)
fqsmmstinnqlkalkvipviaidnaediiplgkvlaenglpaaeitfrsdaaveairll
rqaqpemligagtilngeqalaakeagatfvvspgfnpntvracqeigidivpgvnnpst
veaalemglttlkffpaeasggismvkslvgpygdirlmptggitpsnidnylaipqvla
cggtwmvdkklvtngewdeiarltreiveqvnp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4e38C (C:)
mhhhhhhssgvdlgtenlyfqsmmstinnqlkalkvipviaidnaediiplgkvlaengl
paaeitfrsdaaveairllrqaqpemligagtilngeqalaakeagatfvvspgfnpntv
racqeigidivpgvnnpstveaalemglttlkffpaeasggismvkslvgpygdirlmpt
ggitpsnidnylaipqvlacggtwmvdkklvtngewdeiarltreiveqvnp
Sequence, based on observed residues (ATOM records): (download)
>4e38C (C:)
hhssgvdlgtenlyfqsmmstinnqlkalkvipviaidnaediiplgkvlaenglpaaei
tfrsdaaveairllrqaqpemligagtilngeqalaakeagatfvvspgfnpntvracqe
igidivpgvnnpstveaalemglttlkffpaeasggismvkslvgpygdirlmptggitp
snidnylaipqvlacggtwmvdkklvtngewdeiarltreiveqvnp